Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE8Q86YQ8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE8Q86YQ8 AC025884.2-201ENST00000553429 711 ntBASIC25.25■■□□□ 1.63
CPNE8Q86YQ8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.25■■□□□ 1.63
CPNE8Q86YQ8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CPNE8Q86YQ8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE8Q86YQ8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 AC022211.4-201ENST00000625094 2161 ntBASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 AC138932.3-201ENST00000567634 1902 ntBASIC25.24■■□□□ 1.63
CPNE8Q86YQ8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 AC092296.2-201ENST00000589470 999 ntBASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CPNE8Q86YQ8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CPNE8Q86YQ8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPNE8Q86YQ8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.22■■□□□ 1.63
CPNE8Q86YQ8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CPNE8Q86YQ8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE8Q86YQ8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CPNE8Q86YQ8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CPNE8Q86YQ8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE8Q86YQ8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
CPNE8Q86YQ8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.19■■□□□ 1.62
CPNE8Q86YQ8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE8Q86YQ8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.19■■□□□ 1.62
CPNE8Q86YQ8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE8Q86YQ8 AC093323.1-202ENST00000635031 2045 ntBASIC25.19■■□□□ 1.62
CPNE8Q86YQ8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CPNE8Q86YQ8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.18■■□□□ 1.62
CPNE8Q86YQ8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.18■■□□□ 1.62
CPNE8Q86YQ8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CPNE8Q86YQ8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE8Q86YQ8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE8Q86YQ8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.17■■□□□ 1.62
CPNE8Q86YQ8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE8Q86YQ8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE8Q86YQ8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.16■■□□□ 1.62
CPNE8Q86YQ8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE8Q86YQ8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE8Q86YQ8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE8Q86YQ8 AC142381.3-201ENST00000568208 1670 ntBASIC25.16■■□□□ 1.62
CPNE8Q86YQ8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE8Q86YQ8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.15■■□□□ 1.62
CPNE8Q86YQ8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.15■■□□□ 1.62
CPNE8Q86YQ8 AC022413.1-201ENST00000624602 984 ntBASIC25.15■■□□□ 1.62
CPNE8Q86YQ8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE8Q86YQ8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CPNE8Q86YQ8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPNE8Q86YQ8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CPNE8Q86YQ8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPNE8Q86YQ8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.14■■□□□ 1.61
CPNE8Q86YQ8 SMPD5-203ENST00000639008 1464 ntBASIC25.14■■□□□ 1.61
CPNE8Q86YQ8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CPNE8Q86YQ8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE8Q86YQ8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.13■■□□□ 1.61
CPNE8Q86YQ8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE8Q86YQ8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE8Q86YQ8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CPNE8Q86YQ8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE8Q86YQ8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE8Q86YQ8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE8Q86YQ8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.12■■□□□ 1.61
CPNE8Q86YQ8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.12■■□□□ 1.61
CPNE8Q86YQ8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CPNE8Q86YQ8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.11■■□□□ 1.61
CPNE8Q86YQ8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPNE8Q86YQ8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
CPNE8Q86YQ8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CPNE8Q86YQ8 MIR4449-201ENST00000578365 66 ntBASIC25.1■■□□□ 1.61
CPNE8Q86YQ8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.1■■□□□ 1.61
CPNE8Q86YQ8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE8Q86YQ8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE8Q86YQ8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.09■■□□□ 1.61
CPNE8Q86YQ8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms