Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC32.93■■■□□ 2.86
NME9Q86XW9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
NME9Q86XW9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
NME9Q86XW9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NME9Q86XW9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
NME9Q86XW9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
NME9Q86XW9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.91■■■□□ 2.86
NME9Q86XW9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
NME9Q86XW9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
NME9Q86XW9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
NME9Q86XW9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32.9■■■□□ 2.86
NME9Q86XW9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.9■■■□□ 2.86
NME9Q86XW9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
NME9Q86XW9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
NME9Q86XW9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.88■■■□□ 2.85
NME9Q86XW9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.88■■■□□ 2.85
NME9Q86XW9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
NME9Q86XW9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC32.88■■■□□ 2.85
NME9Q86XW9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.88■■■□□ 2.85
NME9Q86XW9 AC142086.6-201ENST00000621154 1765 ntBASIC32.88■■■□□ 2.85
NME9Q86XW9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
NME9Q86XW9 AL592295.1-201ENST00000400984 884 ntBASIC32.87■■■□□ 2.85
NME9Q86XW9 THA1P-201ENST00000590384 1145 ntBASIC32.87■■■□□ 2.85
NME9Q86XW9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.86■■■□□ 2.85
NME9Q86XW9 AC239859.2-201ENST00000444165 318 ntBASIC32.86■■■□□ 2.85
NME9Q86XW9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
NME9Q86XW9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.86■■■□□ 2.85
NME9Q86XW9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
NME9Q86XW9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.85■■■□□ 2.85
NME9Q86XW9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
NME9Q86XW9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
NME9Q86XW9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
NME9Q86XW9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC32.85■■■□□ 2.85
NME9Q86XW9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NME9Q86XW9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.84■■■□□ 2.85
NME9Q86XW9 AC131212.1-201ENST00000613771 668 ntBASIC32.84■■■□□ 2.85
NME9Q86XW9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.83■■■□□ 2.85
NME9Q86XW9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.83■■■□□ 2.85
NME9Q86XW9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
NME9Q86XW9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
NME9Q86XW9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.81■■■□□ 2.84
NME9Q86XW9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
NME9Q86XW9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC32.81■■■□□ 2.84
NME9Q86XW9 AL356441.2-201ENST00000443009 864 ntBASIC32.81■■■□□ 2.84
NME9Q86XW9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.81■■■□□ 2.84
NME9Q86XW9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.81■■■□□ 2.84
NME9Q86XW9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
NME9Q86XW9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NME9Q86XW9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NME9Q86XW9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NME9Q86XW9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.8■■■□□ 2.84
NME9Q86XW9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.79■■■□□ 2.84
NME9Q86XW9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NME9Q86XW9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.79■■■□□ 2.84
NME9Q86XW9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
NME9Q86XW9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
NME9Q86XW9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
NME9Q86XW9 KRT18P10-201ENST00000388836 1287 ntBASIC32.78■■■□□ 2.84
NME9Q86XW9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
NME9Q86XW9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
NME9Q86XW9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
NME9Q86XW9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
NME9Q86XW9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
NME9Q86XW9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.76■■■□□ 2.84
NME9Q86XW9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.76■■■□□ 2.83
NME9Q86XW9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
NME9Q86XW9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.75■■■□□ 2.83
NME9Q86XW9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
NME9Q86XW9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.75■■■□□ 2.83
NME9Q86XW9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.75■■■□□ 2.83
NME9Q86XW9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NME9Q86XW9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NME9Q86XW9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.74■■■□□ 2.83
NME9Q86XW9 Z92544.1-202ENST00000571933 1220 ntBASIC32.74■■■□□ 2.83
NME9Q86XW9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.74■■■□□ 2.83
NME9Q86XW9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
NME9Q86XW9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.73■■■□□ 2.83
NME9Q86XW9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
NME9Q86XW9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.73■■■□□ 2.83
NME9Q86XW9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.73■■■□□ 2.83
NME9Q86XW9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
NME9Q86XW9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
NME9Q86XW9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NME9Q86XW9 AC022616.5-201ENST00000518796 181 ntBASIC32.72■■■□□ 2.83
NME9Q86XW9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
NME9Q86XW9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC32.72■■■□□ 2.83
NME9Q86XW9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NME9Q86XW9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC32.72■■■□□ 2.83
NME9Q86XW9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NME9Q86XW9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NME9Q86XW9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
NME9Q86XW9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
NME9Q86XW9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.71■■■□□ 2.83
NME9Q86XW9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
NME9Q86XW9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
NME9Q86XW9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
NME9Q86XW9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
NME9Q86XW9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
NME9Q86XW9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
NME9Q86XW9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms