Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF130Q86XS8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF130Q86XS8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF130Q86XS8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF130Q86XS8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF130Q86XS8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF130Q86XS8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF130Q86XS8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF130Q86XS8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF130Q86XS8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF130Q86XS8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF130Q86XS8 AC022211.4-201ENST00000625094 2161 ntBASIC22.55■■□□□ 1.2
RNF130Q86XS8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF130Q86XS8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF130Q86XS8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF130Q86XS8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF130Q86XS8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF130Q86XS8 AC142381.3-201ENST00000568208 1670 ntBASIC22.54■■□□□ 1.2
RNF130Q86XS8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RNF130Q86XS8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF130Q86XS8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF130Q86XS8 AL157400.5-201ENST00000507624 621 ntBASIC22.53■■□□□ 1.2
RNF130Q86XS8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF130Q86XS8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF130Q86XS8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF130Q86XS8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF130Q86XS8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF130Q86XS8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF130Q86XS8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF130Q86XS8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF130Q86XS8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF130Q86XS8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF130Q86XS8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF130Q86XS8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF130Q86XS8 AC060814.1-201ENST00000554326 538 ntBASIC22.5■■□□□ 1.19
RNF130Q86XS8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF130Q86XS8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF130Q86XS8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF130Q86XS8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RNF130Q86XS8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF130Q86XS8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF130Q86XS8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF130Q86XS8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF130Q86XS8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF130Q86XS8 AC138932.3-201ENST00000567634 1902 ntBASIC22.49■■□□□ 1.19
RNF130Q86XS8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF130Q86XS8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF130Q86XS8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF130Q86XS8 AC093323.1-202ENST00000635031 2045 ntBASIC22.48■■□□□ 1.19
RNF130Q86XS8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF130Q86XS8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF130Q86XS8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF130Q86XS8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF130Q86XS8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF130Q86XS8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF130Q86XS8 MIR639-201ENST00000384974 98 ntBASIC22.47■■□□□ 1.19
RNF130Q86XS8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF130Q86XS8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF130Q86XS8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF130Q86XS8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF130Q86XS8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF130Q86XS8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RNF130Q86XS8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF130Q86XS8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF130Q86XS8 AC025884.2-201ENST00000553429 711 ntBASIC22.46■■□□□ 1.19
RNF130Q86XS8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF130Q86XS8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF130Q86XS8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF130Q86XS8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
RNF130Q86XS8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RNF130Q86XS8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF130Q86XS8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF130Q86XS8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF130Q86XS8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF130Q86XS8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF130Q86XS8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF130Q86XS8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.44■■□□□ 1.18
RNF130Q86XS8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF130Q86XS8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF130Q86XS8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
RNF130Q86XS8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF130Q86XS8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF130Q86XS8 AC097639.1-201ENST00000565519 1891 ntBASIC22.43■■□□□ 1.18
RNF130Q86XS8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF130Q86XS8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
RNF130Q86XS8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF130Q86XS8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms