Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCRAQ6ISU1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.34■■□□□ 1.65
PTCRAQ6ISU1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCRAQ6ISU1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCRAQ6ISU1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCRAQ6ISU1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
PTCRAQ6ISU1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCRAQ6ISU1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PTCRAQ6ISU1 AC026271.2-201ENST00000428091 497 ntBASIC25.32■■□□□ 1.64
PTCRAQ6ISU1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCRAQ6ISU1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTCRAQ6ISU1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCRAQ6ISU1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTCRAQ6ISU1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.31■■□□□ 1.64
PTCRAQ6ISU1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.31■■□□□ 1.64
PTCRAQ6ISU1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.31■■□□□ 1.64
PTCRAQ6ISU1 ABCB10P3-201ENST00000561950 2166 ntBASIC25.3■■□□□ 1.64
PTCRAQ6ISU1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTCRAQ6ISU1 MTDHP2-201ENST00000601468 714 ntBASIC25.3■■□□□ 1.64
PTCRAQ6ISU1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTCRAQ6ISU1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTCRAQ6ISU1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.29■■□□□ 1.64
PTCRAQ6ISU1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.29■■□□□ 1.64
PTCRAQ6ISU1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
PTCRAQ6ISU1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTCRAQ6ISU1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.28■■□□□ 1.64
PTCRAQ6ISU1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTCRAQ6ISU1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PTCRAQ6ISU1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 AC142381.2-201ENST00000566120 298 ntBASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 MIR5787-201ENST00000611784 55 ntBASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PTCRAQ6ISU1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.25■■□□□ 1.63
PTCRAQ6ISU1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.25■■□□□ 1.63
PTCRAQ6ISU1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PTCRAQ6ISU1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
PTCRAQ6ISU1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PTCRAQ6ISU1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PTCRAQ6ISU1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PTCRAQ6ISU1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
PTCRAQ6ISU1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.24■■□□□ 1.63
PTCRAQ6ISU1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.24■■□□□ 1.63
PTCRAQ6ISU1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTCRAQ6ISU1 AC135279.3-201ENST00000610945 1311 ntBASIC25.23■■□□□ 1.63
PTCRAQ6ISU1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTCRAQ6ISU1 MIR4281-201ENST00000580852 62 ntBASIC25.23■■□□□ 1.63
PTCRAQ6ISU1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.23■■□□□ 1.63
PTCRAQ6ISU1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PTCRAQ6ISU1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 PBX2P1-201ENST00000493219 1291 ntBASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 AL512631.2-201ENST00000604634 923 ntBASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 AC106739.1-201ENST00000617035 715 ntBASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PTCRAQ6ISU1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.21■■□□□ 1.63
PTCRAQ6ISU1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.2■■□□□ 1.63
PTCRAQ6ISU1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PTCRAQ6ISU1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PTCRAQ6ISU1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.2■■□□□ 1.62
PTCRAQ6ISU1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
PTCRAQ6ISU1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.19■■□□□ 1.62
PTCRAQ6ISU1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.18■■□□□ 1.62
PTCRAQ6ISU1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.18■■□□□ 1.62
PTCRAQ6ISU1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PTCRAQ6ISU1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PTCRAQ6ISU1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PTCRAQ6ISU1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.16■■□□□ 1.62
PTCRAQ6ISU1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PTCRAQ6ISU1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PTCRAQ6ISU1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PTCRAQ6ISU1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PTCRAQ6ISU1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PTCRAQ6ISU1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PTCRAQ6ISU1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PTCRAQ6ISU1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.15■■□□□ 1.62
PTCRAQ6ISU1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms