Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.88■■■□□ 2.05
KRT40Q6A162 AC020928.2-201ENST00000588717 2197 ntBASIC27.87■■■□□ 2.05
KRT40Q6A162 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
KRT40Q6A162 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KRT40Q6A162 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.87■■■□□ 2.05
KRT40Q6A162 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.87■■■□□ 2.05
KRT40Q6A162 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.86■■■□□ 2.05
KRT40Q6A162 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.86■■■□□ 2.05
KRT40Q6A162 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.86■■■□□ 2.05
KRT40Q6A162 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
KRT40Q6A162 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.85■■■□□ 2.05
KRT40Q6A162 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.85■■■□□ 2.05
KRT40Q6A162 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
KRT40Q6A162 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.85■■■□□ 2.05
KRT40Q6A162 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
KRT40Q6A162 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
KRT40Q6A162 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
KRT40Q6A162 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
KRT40Q6A162 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
KRT40Q6A162 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.83■■■□□ 2.05
KRT40Q6A162 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
KRT40Q6A162 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
KRT40Q6A162 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
KRT40Q6A162 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.83■■■□□ 2.05
KRT40Q6A162 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.83■■■□□ 2.05
KRT40Q6A162 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.83■■■□□ 2.05
KRT40Q6A162 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
KRT40Q6A162 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.82■■■□□ 2.04
KRT40Q6A162 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
KRT40Q6A162 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KRT40Q6A162 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.82■■■□□ 2.04
KRT40Q6A162 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
KRT40Q6A162 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.81■■■□□ 2.04
KRT40Q6A162 RP9P-202ENST00000450133 1212 ntBASIC27.81■■■□□ 2.04
KRT40Q6A162 RARRES2P1-201ENST00000474487 481 ntBASIC27.81■■■□□ 2.04
KRT40Q6A162 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KRT40Q6A162 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
KRT40Q6A162 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KRT40Q6A162 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.8■■■□□ 2.04
KRT40Q6A162 AC007029.1-201ENST00000604183 313 ntBASIC27.8■■■□□ 2.04
KRT40Q6A162 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
KRT40Q6A162 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KRT40Q6A162 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KRT40Q6A162 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
KRT40Q6A162 AC093536.1-201ENST00000569153 554 ntBASIC27.79■■■□□ 2.04
KRT40Q6A162 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
KRT40Q6A162 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KRT40Q6A162 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
KRT40Q6A162 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KRT40Q6A162 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
KRT40Q6A162 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KRT40Q6A162 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
KRT40Q6A162 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
KRT40Q6A162 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
KRT40Q6A162 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.76■■■□□ 2.03
KRT40Q6A162 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
KRT40Q6A162 AC004987.1-201ENST00000428627 508 ntBASIC27.76■■■□□ 2.03
KRT40Q6A162 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
KRT40Q6A162 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
KRT40Q6A162 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.75■■■□□ 2.03
KRT40Q6A162 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
KRT40Q6A162 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
KRT40Q6A162 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
KRT40Q6A162 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.75■■■□□ 2.03
KRT40Q6A162 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
KRT40Q6A162 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.74■■■□□ 2.03
KRT40Q6A162 TSPY13P-201ENST00000338964 914 ntBASIC27.74■■■□□ 2.03
KRT40Q6A162 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
KRT40Q6A162 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.74■■■□□ 2.03
KRT40Q6A162 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.74■■■□□ 2.03
KRT40Q6A162 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
KRT40Q6A162 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
KRT40Q6A162 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
KRT40Q6A162 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
KRT40Q6A162 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
KRT40Q6A162 KRT18P60-201ENST00000312876 1297 ntBASIC27.72■■■□□ 2.03
KRT40Q6A162 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
KRT40Q6A162 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
KRT40Q6A162 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KRT40Q6A162 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KRT40Q6A162 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.71■■■□□ 2.03
KRT40Q6A162 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.71■■■□□ 2.03
KRT40Q6A162 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
KRT40Q6A162 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
KRT40Q6A162 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.71■■■□□ 2.03
KRT40Q6A162 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.71■■■□□ 2.03
KRT40Q6A162 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.71■■■□□ 2.03
KRT40Q6A162 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.71■■■□□ 2.03
KRT40Q6A162 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
KRT40Q6A162 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
KRT40Q6A162 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
KRT40Q6A162 ATP5G2P3-201ENST00000429083 425 ntBASIC27.7■■■□□ 2.02
KRT40Q6A162 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.7■■■□□ 2.02
KRT40Q6A162 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms