Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
TTC39AQ5SRH9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.41■■■□□ 2.3
TTC39AQ5SRH9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.41■■■□□ 2.3
TTC39AQ5SRH9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
TTC39AQ5SRH9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
TTC39AQ5SRH9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.4■■■□□ 2.3
TTC39AQ5SRH9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
TTC39AQ5SRH9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.4■■■□□ 2.3
TTC39AQ5SRH9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TTC39AQ5SRH9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
TTC39AQ5SRH9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
TTC39AQ5SRH9 AC010980.1-201ENST00000587192 1142 ntBASIC29.39■■■□□ 2.3
TTC39AQ5SRH9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.39■■■□□ 2.29
TTC39AQ5SRH9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
TTC39AQ5SRH9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TTC39AQ5SRH9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
TTC39AQ5SRH9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
TTC39AQ5SRH9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.37■■■□□ 2.29
TTC39AQ5SRH9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TTC39AQ5SRH9 RPS2P7-201ENST00000447334 885 ntBASIC29.37■■■□□ 2.29
TTC39AQ5SRH9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TTC39AQ5SRH9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.37■■■□□ 2.29
TTC39AQ5SRH9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
TTC39AQ5SRH9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TTC39AQ5SRH9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 AC087393.1-201ENST00000582896 145 ntBASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 AC074183.2-201ENST00000623112 922 ntBASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.35■■■□□ 2.29
TTC39AQ5SRH9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TTC39AQ5SRH9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
TTC39AQ5SRH9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TTC39AQ5SRH9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
TTC39AQ5SRH9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TTC39AQ5SRH9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 KRT18P10-201ENST00000388836 1287 ntBASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
TTC39AQ5SRH9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TTC39AQ5SRH9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TTC39AQ5SRH9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TTC39AQ5SRH9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.3■■■□□ 2.28
TTC39AQ5SRH9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
TTC39AQ5SRH9 PVT1_1.1-201ENST00000615125 194 ntBASIC29.3■■■□□ 2.28
TTC39AQ5SRH9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.29■■■□□ 2.28
TTC39AQ5SRH9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 RARRES2P1-201ENST00000474487 481 ntBASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TTC39AQ5SRH9 ERN1-208ENST00000606895 2068 ntBASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.27■■■□□ 2.28
TTC39AQ5SRH9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.26■■■□□ 2.27
TTC39AQ5SRH9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
TTC39AQ5SRH9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.26■■■□□ 2.27
TTC39AQ5SRH9 KRT8P33-201ENST00000508125 1423 ntBASIC29.26■■■□□ 2.27
TTC39AQ5SRH9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
TTC39AQ5SRH9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC29.25■■■□□ 2.27
TTC39AQ5SRH9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TTC39AQ5SRH9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TTC39AQ5SRH9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
TTC39AQ5SRH9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.24■■■□□ 2.27
TTC39AQ5SRH9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
TTC39AQ5SRH9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC29.24■■■□□ 2.27
TTC39AQ5SRH9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
TTC39AQ5SRH9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.24■■■□□ 2.27
TTC39AQ5SRH9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.23■■■□□ 2.27
TTC39AQ5SRH9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TTC39AQ5SRH9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.23■■■□□ 2.27
TTC39AQ5SRH9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.23■■■□□ 2.27
TTC39AQ5SRH9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.23■■■□□ 2.27
TTC39AQ5SRH9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
TTC39AQ5SRH9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms