Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRK2Q5S007 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LRRK2Q5S007 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRK2Q5S007 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.4■■□□□ 1.02
LRRK2Q5S007 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRRK2Q5S007 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRRK2Q5S007 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRRK2Q5S007 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.4■■□□□ 1.02
LRRK2Q5S007 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRRK2Q5S007 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
LRRK2Q5S007 AC097381.1-201ENST00000429019 1296 ntBASIC21.39■■□□□ 1.02
LRRK2Q5S007 AC120024.1-201ENST00000562672 995 ntBASIC21.39■■□□□ 1.01
LRRK2Q5S007 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.39■■□□□ 1.01
LRRK2Q5S007 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.39■■□□□ 1.01
LRRK2Q5S007 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRK2Q5S007 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.39■■□□□ 1.01
LRRK2Q5S007 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRK2Q5S007 AL359504.2-201ENST00000605506 1601 ntBASIC21.38■■□□□ 1.01
LRRK2Q5S007 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LRRK2Q5S007 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRK2Q5S007 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRK2Q5S007 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LRRK2Q5S007 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.38■■□□□ 1.01
LRRK2Q5S007 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRK2Q5S007 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRK2Q5S007 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LRRK2Q5S007 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRK2Q5S007 PBX2P1-201ENST00000493219 1291 ntBASIC21.37■■□□□ 1.01
LRRK2Q5S007 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRK2Q5S007 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.37■■□□□ 1.01
LRRK2Q5S007 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRK2Q5S007 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRK2Q5S007 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRK2Q5S007 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRK2Q5S007 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.35■■□□□ 1.01
LRRK2Q5S007 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRK2Q5S007 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.35■■□□□ 1.01
LRRK2Q5S007 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.35■■□□□ 1.01
LRRK2Q5S007 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRK2Q5S007 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
LRRK2Q5S007 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.34■■□□□ 1.01
LRRK2Q5S007 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.34■■□□□ 1.01
LRRK2Q5S007 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRK2Q5S007 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.34■■□□□ 1.01
LRRK2Q5S007 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.34■■□□□ 1.01
LRRK2Q5S007 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.33■■□□□ 1.01
LRRK2Q5S007 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRRK2Q5S007 EDA-201ENST00000338901 1233 ntBASIC21.33■■□□□ 1.01
LRRK2Q5S007 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.33■■□□□ 1.01
LRRK2Q5S007 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRK2Q5S007 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRK2Q5S007 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.33■■□□□ 1.01
LRRK2Q5S007 MTDHP2-201ENST00000601468 714 ntBASIC21.33■■□□□ 1.01
LRRK2Q5S007 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.33■■□□□ 1.01
LRRK2Q5S007 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRK2Q5S007 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.33■■□□□ 1.01
LRRK2Q5S007 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
LRRK2Q5S007 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.33■■□□□ 1
LRRK2Q5S007 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.33■■□□□ 1
LRRK2Q5S007 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRK2Q5S007 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LRRK2Q5S007 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRK2Q5S007 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRK2Q5S007 AC105265.2-201ENST00000467189 838 ntBASIC21.31■■□□□ 1
LRRK2Q5S007 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
LRRK2Q5S007 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRRK2Q5S007 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.31■■□□□ 1
LRRK2Q5S007 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRRK2Q5S007 WHAMMP3-201ENST00000611636 1609 ntBASIC21.3■■□□□ 1
LRRK2Q5S007 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.3■■□□□ 1
LRRK2Q5S007 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.3■■□□□ 1
LRRK2Q5S007 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRK2Q5S007 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRK2Q5S007 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRK2Q5S007 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRK2Q5S007 AL355001.2-201ENST00000620617 1191 ntBASIC21.29■■□□□ 1
LRRK2Q5S007 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRK2Q5S007 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.29■■□□□ 1
LRRK2Q5S007 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRK2Q5S007 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.28■■□□□ 1
LRRK2Q5S007 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRK2Q5S007 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.28■■□□□ 1
LRRK2Q5S007 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.28■■□□□ 1
LRRK2Q5S007 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRK2Q5S007 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
LRRK2Q5S007 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRK2Q5S007 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRK2Q5S007 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRRK2Q5S007 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRK2Q5S007 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRK2Q5S007 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRK2Q5S007 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRK2Q5S007 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.26■□□□□ 0.99
LRRK2Q5S007 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LRRK2Q5S007 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRK2Q5S007 AF213884.3-201ENST00000563833 479 ntBASIC21.25■□□□□ 0.99
LRRK2Q5S007 RARRES2P11-201ENST00000635158 484 ntBASIC21.25■□□□□ 0.99
LRRK2Q5S007 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRK2Q5S007 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRK2Q5S007 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms