Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 HGH1YGR187C 1185 nt6.47□□□□□ -1.37
RPA49Q01080 AVO2YMR068W 1281 nt6.47□□□□□ -1.37
RPA49Q01080 YMR119W-AYMR119W-A 375 nt6.47□□□□□ -1.37
RPA49Q01080 YPR160C-AYPR160C-A 285 nt6.47□□□□□ -1.37
RPA49Q01080 NMD5YJR132W 3147 nt6.47□□□□□ -1.37
RPA49Q01080 GLN3YER040W 2193 nt6.47□□□□□ -1.37
RPA49Q01080 YEL009C-AYEL009C-A 408 nt6.46□□□□□ -1.38
RPA49Q01080 YEL068CYEL068C 333 nt6.46□□□□□ -1.38
RPA49Q01080 ATG17YLR423C 1254 nt6.46□□□□□ -1.38
RPA49Q01080 PRP2YNR011C 2631 nt6.46□□□□□ -1.38
RPA49Q01080 DAP1YPL170W 459 nt6.46□□□□□ -1.38
RPA49Q01080 TIF2YJL138C 1188 nt6.45□□□□□ -1.38
RPA49Q01080 TIF1YKR059W 1188 nt6.45□□□□□ -1.38
RPA49Q01080 ENV7YPL236C 1095 nt6.45□□□□□ -1.38
RPA49Q01080 CLN1YMR199W 1641 nt6.45□□□□□ -1.38
RPA49Q01080 NSE5YML023C 1671 nt6.45□□□□□ -1.38
RPA49Q01080 LYS21YDL131W 1323 nt6.45□□□□□ -1.38
RPA49Q01080 HST3YOR025W 1344 nt6.45□□□□□ -1.38
RPA49Q01080 JIP4YDR475C 2631 nt6.45□□□□□ -1.38
RPA49Q01080 ICS3YJL077C 396 nt6.44□□□□□ -1.38
RPA49Q01080 HAP3YBL021C 435 nt6.44□□□□□ -1.38
RPA49Q01080 OST3YOR085W 1053 nt6.44□□□□□ -1.38
RPA49Q01080 EMP65YER140W 1671 nt6.44□□□□□ -1.38
RPA49Q01080 AGP2YBR132C 1791 nt6.44□□□□□ -1.38
RPA49Q01080 GPB2YAL056W 2643 nt6.44□□□□□ -1.38
RPA49Q01080 GUD1YDL238C 1470 nt6.43□□□□□ -1.38
RPA49Q01080 OPT1YJL212C 2400 nt6.43□□□□□ -1.38
RPA49Q01080 YDL129WYDL129W 876 nt6.43□□□□□ -1.38
RPA49Q01080 MRPL1YDR116C 858 nt6.43□□□□□ -1.38
RPA49Q01080 FPR2YDR519W 408 nt6.43□□□□□ -1.38
RPA49Q01080 CIN4YMR138W 576 nt6.43□□□□□ -1.38
RPA49Q01080 YPR114WYPR114W 948 nt6.43□□□□□ -1.38
RPA49Q01080 SPS22YCL048W 1392 nt6.43□□□□□ -1.38
RPA49Q01080 SIT4YDL047W 936 nt6.42□□□□□ -1.38
RPA49Q01080 YJL211CYJL211C 444 nt6.42□□□□□ -1.38
RPA49Q01080 YNL042W-BYNL042W-B 258 nt6.42□□□□□ -1.38
RPA49Q01080 ACO1YLR304C 2337 nt6.42□□□□□ -1.38
RPA49Q01080 TFC6YDR362C 2019 nt6.42□□□□□ -1.38
RPA49Q01080 GPA1YHR005C 1419 nt6.42□□□□□ -1.38
RPA49Q01080 HSM3YBR272C 1443 nt6.42□□□□□ -1.38
RPA49Q01080 RPT3YDR394W 1287 nt6.41□□□□□ -1.38
RPA49Q01080 GTT3YEL017W 1014 nt6.41□□□□□ -1.38
RPA49Q01080 YHM2YMR241W 945 nt6.41□□□□□ -1.38
RPA49Q01080 PDR18YNR070W 4002 nt6.41□□□□□ -1.38
RPA49Q01080 BNS1YGR230W 414 nt6.4□□□□□ -1.38
RPA49Q01080 YUR1YJL139C 1287 nt6.4□□□□□ -1.38
RPA49Q01080 TOS2YGR221C 1869 nt6.39□□□□□ -1.39
RPA49Q01080 PFK2YMR205C 2880 nt6.39□□□□□ -1.39
RPA49Q01080 ORM1YGR038W 669 nt6.39□□□□□ -1.39
RPA49Q01080 tR(ACG)DtR(ACG)D 73 nt6.39□□□□□ -1.39
RPA49Q01080 tR(ACG)EtR(ACG)E 73 nt6.39□□□□□ -1.39
RPA49Q01080 tR(ACG)KtR(ACG)K 73 nt6.39□□□□□ -1.39
RPA49Q01080 tR(ACG)LtR(ACG)L 73 nt6.39□□□□□ -1.39
RPA49Q01080 tR(ACG)OtR(ACG)O 73 nt6.39□□□□□ -1.39
RPA49Q01080 ECM19YLR390W 339 nt6.39□□□□□ -1.39
RPA49Q01080 MRPS12YNR036C 462 nt6.39□□□□□ -1.39
RPA49Q01080 HST2YPL015C 1074 nt6.39□□□□□ -1.39
RPA49Q01080 UIP4YPL186C 915 nt6.39□□□□□ -1.39
RPA49Q01080 TEP1YNL128W 1305 nt6.39□□□□□ -1.39
RPA49Q01080 ADE12YNL220W 1302 nt6.39□□□□□ -1.39
RPA49Q01080 PYK2YOR347C 1521 nt6.39□□□□□ -1.39
RPA49Q01080 CMR1YDL156W 1569 nt6.39□□□□□ -1.39
RPA49Q01080 ATF1YOR377W 1578 nt6.39□□□□□ -1.39
RPA49Q01080 KKQ8YKL168C 2175 nt6.38□□□□□ -1.39
RPA49Q01080 LCP5YER127W 1074 nt6.38□□□□□ -1.39
RPA49Q01080 YFL052WYFL052W 1398 nt6.38□□□□□ -1.39
RPA49Q01080 PET112YBL080C 1626 nt6.38□□□□□ -1.39
RPA49Q01080 RAD24YER173W 1980 nt6.38□□□□□ -1.39
RPA49Q01080 GAA1YLR088W 1845 nt6.37□□□□□ -1.39
RPA49Q01080 GYP8YFL027C 1494 nt6.37□□□□□ -1.39
RPA49Q01080 ATG4YNL223W 1485 nt6.37□□□□□ -1.39
RPA49Q01080 ERG12YMR208W 1332 nt6.37□□□□□ -1.39
RPA49Q01080 GPI11YDR302W 660 nt6.37□□□□□ -1.39
RPA49Q01080 YDR401WYDR401W 564 nt6.37□□□□□ -1.39
RPA49Q01080 LEU5YHR002W 1074 nt6.37□□□□□ -1.39
RPA49Q01080 GLN1YPR035W 1113 nt6.37□□□□□ -1.39
RPA49Q01080 VTS1YOR359W 1572 nt6.36□□□□□ -1.39
RPA49Q01080 ISC1YER019W 1434 nt6.36□□□□□ -1.39
RPA49Q01080 AI5_BETAQ0075 1065 nt6.36□□□□□ -1.39
RPA49Q01080 PRI2YKL045W 1587 nt6.35□□□□□ -1.39
RPA49Q01080 SKI2YLR398C 3864 nt6.35□□□□□ -1.39
RPA49Q01080 COX20YDR231C 618 nt6.35□□□□□ -1.39
RPA49Q01080 YML083CYML083C 1257 nt6.35□□□□□ -1.39
RPA49Q01080 MNS1YJR131W 1650 nt6.35□□□□□ -1.39
RPA49Q01080 PHB1YGR132C 864 nt6.34□□□□□ -1.39
RPA49Q01080 YML012C-AYML012C-A 378 nt6.34□□□□□ -1.39
RPA49Q01080 IFA38YBR159W 1044 nt6.34□□□□□ -1.39
RPA49Q01080 MRPS5YBR251W 924 nt6.34□□□□□ -1.39
RPA49Q01080 YHL017WYHL017W 1599 nt6.34□□□□□ -1.39
RPA49Q01080 KNS1YLL019C 2214 nt6.34□□□□□ -1.39
RPA49Q01080 TPO3YPR156C 1869 nt6.34□□□□□ -1.39
RPA49Q01080 EEB1YPL095C 1371 nt6.33□□□□□ -1.4
RPA49Q01080 PGK1YCR012W 1251 nt6.33□□□□□ -1.4
RPA49Q01080 YLR126CYLR126C 756 nt6.33□□□□□ -1.4
RPA49Q01080 ECM30YLR436C 3825 nt6.33□□□□□ -1.4
RPA49Q01080 MCM3YEL032W 2916 nt6.33□□□□□ -1.4
RPA49Q01080 FRS2YFL022C 1512 nt6.32□□□□□ -1.4
RPA49Q01080 UGX2YDL169C 672 nt6.32□□□□□ -1.4
RPA49Q01080 FZF1YGL254W 900 nt6.32□□□□□ -1.4
RPA49Q01080 ARA2YMR041C 1008 nt6.32□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms