Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A1P61619 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A1P61619 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC61A1P61619 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SEC61A1P61619 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEC61A1P61619 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SEC61A1P61619 AC133561.1-201ENST00000568600 2415 ntBASIC20.78■□□□□ 0.92
SEC61A1P61619 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A1P61619 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A1P61619 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC61A1P61619 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
SEC61A1P61619 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A1P61619 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A1P61619 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.77■□□□□ 0.92
SEC61A1P61619 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A1P61619 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.77■□□□□ 0.92
SEC61A1P61619 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC61A1P61619 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.77■□□□□ 0.92
SEC61A1P61619 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.77■□□□□ 0.92
SEC61A1P61619 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.77■□□□□ 0.92
SEC61A1P61619 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.91
SEC61A1P61619 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SEC61A1P61619 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SEC61A1P61619 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.76■□□□□ 0.91
SEC61A1P61619 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SEC61A1P61619 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.76■□□□□ 0.91
SEC61A1P61619 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.76■□□□□ 0.91
SEC61A1P61619 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.76■□□□□ 0.91
SEC61A1P61619 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC61A1P61619 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SEC61A1P61619 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A1P61619 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A1P61619 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SEC61A1P61619 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A1P61619 AC126177.7-201ENST00000547904 679 ntBASIC20.75■□□□□ 0.91
SEC61A1P61619 ABHD17AP5-201ENST00000580133 923 ntBASIC20.75■□□□□ 0.91
SEC61A1P61619 AC092296.2-201ENST00000589470 999 ntBASIC20.75■□□□□ 0.91
SEC61A1P61619 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A1P61619 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SEC61A1P61619 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SEC61A1P61619 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEC61A1P61619 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.74■□□□□ 0.91
SEC61A1P61619 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A1P61619 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A1P61619 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.74■□□□□ 0.91
SEC61A1P61619 AL359258.2-201ENST00000564063 1566 ntBASIC20.74■□□□□ 0.91
SEC61A1P61619 AC092803.2-201ENST00000564287 1899 ntBASIC20.74■□□□□ 0.91
SEC61A1P61619 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEC61A1P61619 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SEC61A1P61619 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
SEC61A1P61619 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.73■□□□□ 0.91
SEC61A1P61619 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.73■□□□□ 0.91
SEC61A1P61619 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.73■□□□□ 0.91
SEC61A1P61619 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SEC61A1P61619 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SEC61A1P61619 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SEC61A1P61619 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SEC61A1P61619 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC61A1P61619 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A1P61619 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A1P61619 AL157400.5-201ENST00000507624 621 ntBASIC20.72■□□□□ 0.91
SEC61A1P61619 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.72■□□□□ 0.91
SEC61A1P61619 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEC61A1P61619 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SEC61A1P61619 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SEC61A1P61619 ERN1-208ENST00000606895 2068 ntBASIC20.71■□□□□ 0.91
SEC61A1P61619 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC61A1P61619 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SEC61A1P61619 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.71■□□□□ 0.91
SEC61A1P61619 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC61A1P61619 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
SEC61A1P61619 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.7■□□□□ 0.9
SEC61A1P61619 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC61A1P61619 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SEC61A1P61619 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.7■□□□□ 0.9
SEC61A1P61619 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SEC61A1P61619 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC61A1P61619 AP004609.3-201ENST00000610705 1884 ntBASIC20.7■□□□□ 0.9
SEC61A1P61619 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC61A1P61619 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms