Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.79■■□□□ 1.24
WNT3P56703 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
WNT3P56703 AC093323.1-202ENST00000635031 2045 ntBASIC22.79■■□□□ 1.24
WNT3P56703 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
WNT3P56703 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.78■■□□□ 1.24
WNT3P56703 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 GPX1-201ENST00000419349 1106 ntBASIC22.78■■□□□ 1.24
WNT3P56703 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.78■■□□□ 1.24
WNT3P56703 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.78■■□□□ 1.24
WNT3P56703 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.78■■□□□ 1.24
WNT3P56703 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
WNT3P56703 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
WNT3P56703 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
WNT3P56703 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
WNT3P56703 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.77■■□□□ 1.24
WNT3P56703 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
WNT3P56703 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
WNT3P56703 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.77■■□□□ 1.24
WNT3P56703 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.77■■□□□ 1.24
WNT3P56703 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
WNT3P56703 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.77■■□□□ 1.24
WNT3P56703 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
WNT3P56703 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
WNT3P56703 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.76■■□□□ 1.23
WNT3P56703 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
WNT3P56703 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
WNT3P56703 AL157400.5-201ENST00000507624 621 ntBASIC22.76■■□□□ 1.23
WNT3P56703 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.76■■□□□ 1.23
WNT3P56703 AC138932.3-201ENST00000567634 1902 ntBASIC22.76■■□□□ 1.23
WNT3P56703 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.76■■□□□ 1.23
WNT3P56703 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
WNT3P56703 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
WNT3P56703 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
WNT3P56703 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
WNT3P56703 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
WNT3P56703 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
WNT3P56703 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
WNT3P56703 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
WNT3P56703 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
WNT3P56703 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
WNT3P56703 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
WNT3P56703 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
WNT3P56703 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
WNT3P56703 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
WNT3P56703 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
WNT3P56703 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
WNT3P56703 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
WNT3P56703 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
WNT3P56703 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
WNT3P56703 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
WNT3P56703 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
WNT3P56703 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.71■■□□□ 1.23
WNT3P56703 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
WNT3P56703 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
WNT3P56703 RARRES2P2-201ENST00000394842 485 ntBASIC22.7■■□□□ 1.22
WNT3P56703 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.7■■□□□ 1.22
WNT3P56703 AC025884.2-201ENST00000553429 711 ntBASIC22.7■■□□□ 1.22
WNT3P56703 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.7■■□□□ 1.22
WNT3P56703 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.7■■□□□ 1.22
WNT3P56703 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
WNT3P56703 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
WNT3P56703 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
WNT3P56703 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.7■■□□□ 1.22
WNT3P56703 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.69■■□□□ 1.22
WNT3P56703 AC060814.1-201ENST00000554326 538 ntBASIC22.69■■□□□ 1.22
WNT3P56703 AC022413.1-201ENST00000624602 984 ntBASIC22.69■■□□□ 1.22
WNT3P56703 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
WNT3P56703 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
WNT3P56703 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.69■■□□□ 1.22
WNT3P56703 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
WNT3P56703 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
WNT3P56703 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
WNT3P56703 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
WNT3P56703 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.68■■□□□ 1.22
WNT3P56703 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.68■■□□□ 1.22
WNT3P56703 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.68■■□□□ 1.22
WNT3P56703 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.68■■□□□ 1.22
WNT3P56703 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
WNT3P56703 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
WNT3P56703 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
WNT3P56703 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
WNT3P56703 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.66■■□□□ 1.22
WNT3P56703 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
WNT3P56703 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.66■■□□□ 1.22
WNT3P56703 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.66■■□□□ 1.22
WNT3P56703 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.66■■□□□ 1.22
WNT3P56703 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms