Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YHL017WYHL017W 1599 nt8.58□□□□□ -1.04
SSM4P40318 PFK2YMR205C 2880 nt8.57□□□□□ -1.04
SSM4P40318 GIT1YCR098C 1557 nt8.57□□□□□ -1.04
SSM4P40318 FRS2YFL022C 1512 nt8.57□□□□□ -1.04
SSM4P40318 ATG12YBR217W 561 nt8.56□□□□□ -1.04
SSM4P40318 APE3YBR286W 1614 nt8.56□□□□□ -1.04
SSM4P40318 RGT2YDL138W 2292 nt8.56□□□□□ -1.04
SSM4P40318 SEC20YDR498C 1152 nt8.55□□□□□ -1.04
SSM4P40318 MRPS5YBR251W 924 nt8.55□□□□□ -1.04
SSM4P40318 CNE1YAL058W 1509 nt8.55□□□□□ -1.04
SSM4P40318 DJP1YIR004W 1299 nt8.54□□□□□ -1.04
SSM4P40318 GYP8YFL027C 1494 nt8.54□□□□□ -1.04
SSM4P40318 GTT3YEL017W 1014 nt8.54□□□□□ -1.04
SSM4P40318 SNN1YNL086W 309 nt8.54□□□□□ -1.04
SSM4P40318 TOM71YHR117W 1920 nt8.53□□□□□ -1.04
SSM4P40318 YDR109CYDR109C 2148 nt8.53□□□□□ -1.04
SSM4P40318 LEU5YHR002W 1074 nt8.52□□□□□ -1.05
SSM4P40318 EGD2YHR193C 525 nt8.52□□□□□ -1.05
SSM4P40318 PRI2YKL045W 1587 nt8.51□□□□□ -1.05
SSM4P40318 SKY1YMR216C 2229 nt8.51□□□□□ -1.05
SSM4P40318 IRC7YFR055W 1023 nt8.51□□□□□ -1.05
SSM4P40318 FET4YMR319C 1659 nt8.5□□□□□ -1.05
SSM4P40318 GLN3YER040W 2193 nt8.5□□□□□ -1.05
SSM4P40318 RRP4YHR069C 1080 nt8.5□□□□□ -1.05
SSM4P40318 AAD15YOL165C 432 nt8.5□□□□□ -1.05
SSM4P40318 MRK1YDL079C 1506 nt8.49□□□□□ -1.05
SSM4P40318 MRPL1YDR116C 858 nt8.49□□□□□ -1.05
SSM4P40318 RPN11YFR004W 921 nt8.49□□□□□ -1.05
SSM4P40318 PGK1YCR012W 1251 nt8.48□□□□□ -1.05
SSM4P40318 YDL114WYDL114W 927 nt8.48□□□□□ -1.05
SSM4P40318 ICT1YLR099C 1185 nt8.48□□□□□ -1.05
SSM4P40318 ICL2YPR006C 1728 nt8.47□□□□□ -1.05
SSM4P40318 YBR056C-BYBR056C-B 159 nt8.47□□□□□ -1.05
SSM4P40318 SSK22YCR073C 3996 nt8.47□□□□□ -1.05
SSM4P40318 AGP2YBR132C 1791 nt8.46□□□□□ -1.06
SSM4P40318 FPR2YDR519W 408 nt8.46□□□□□ -1.06
SSM4P40318 SYF2YGR129W 648 nt8.46□□□□□ -1.06
SSM4P40318 YJU3YKL094W 942 nt8.46□□□□□ -1.06
SSM4P40318 YOL036WYOL036W 2286 nt8.46□□□□□ -1.06
SSM4P40318 ATO3YDR384C 828 nt8.45□□□□□ -1.06
SSM4P40318 ASK1YKL052C 879 nt8.45□□□□□ -1.06
SSM4P40318 SSP120YLR250W 705 nt8.45□□□□□ -1.06
SSM4P40318 ARA2YMR041C 1008 nt8.45□□□□□ -1.06
SSM4P40318 CSL4YNL232W 879 nt8.45□□□□□ -1.06
SSM4P40318 YOL163WYOL163W 510 nt8.44□□□□□ -1.06
SSM4P40318 PRP24YMR268C 1335 nt8.44□□□□□ -1.06
SSM4P40318 MNN5YJL186W 1761 nt8.43□□□□□ -1.06
SSM4P40318 CIS3YJL158C 684 nt8.43□□□□□ -1.06
SSM4P40318 YBR144CYBR144C 315 nt8.43□□□□□ -1.06
SSM4P40318 APS3YJL024C 585 nt8.42□□□□□ -1.06
SSM4P40318 RPS9AYPL081W 594 nt8.42□□□□□ -1.06
SSM4P40318 YML133CYML133C 4125 nt8.41□□□□□ -1.06
SSM4P40318 RAD3YER171W 2337 nt8.41□□□□□ -1.06
SSM4P40318 CLN1YMR199W 1641 nt8.41□□□□□ -1.06
SSM4P40318 YUR1YJL139C 1287 nt8.41□□□□□ -1.06
SSM4P40318 YNL200CYNL200C 741 nt8.41□□□□□ -1.06
SSM4P40318 SUP19tS(UGA)E 82 nt8.4□□□□□ -1.06
SSM4P40318 SUP17tS(UGA)I 82 nt8.4□□□□□ -1.06
SSM4P40318 SUP16tS(UGA)P 82 nt8.4□□□□□ -1.06
SSM4P40318 MSB3YNL293W 1902 nt8.4□□□□□ -1.06
SSM4P40318 IMA5YJL216C 1746 nt8.4□□□□□ -1.06
SSM4P40318 PUF3YLL013C 2640 nt8.39□□□□□ -1.07
SSM4P40318 XBP1YIL101C 1944 nt8.39□□□□□ -1.07
SSM4P40318 MTF2YDL044C 1323 nt8.39□□□□□ -1.07
SSM4P40318 EDC3YEL015W 1656 nt8.39□□□□□ -1.07
SSM4P40318 YCR047W-AYCR047W-A 207 nt8.38□□□□□ -1.07
SSM4P40318 LST8YNL006W 912 nt8.38□□□□□ -1.07
SSM4P40318 VMA4YOR332W 702 nt8.38□□□□□ -1.07
SSM4P40318 AMD1YML035C 2433 nt8.38□□□□□ -1.07
SSM4P40318 ISC1YER019W 1434 nt8.38□□□□□ -1.07
SSM4P40318 ORC5YNL261W 1440 nt8.38□□□□□ -1.07
SSM4P40318 YML082WYML082W 1950 nt8.37□□□□□ -1.07
SSM4P40318 RPE1YJL121C 717 nt8.37□□□□□ -1.07
SSM4P40318 MRP17YKL003C 396 nt8.37□□□□□ -1.07
SSM4P40318 RTG2YGL252C 1767 nt8.37□□□□□ -1.07
SSM4P40318 ERC1YHR032W 1746 nt8.36□□□□□ -1.07
SSM4P40318 DIA3YDL024C 1407 nt8.36□□□□□ -1.07
SSM4P40318 SUP2tY(GUA)D 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP11tY(GUA)F1 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP6tY(GUA)F2 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP7tY(GUA)J1 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP4tY(GUA)J2 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP5tY(GUA)M1 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP8tY(GUA)M2 75 nt8.35□□□□□ -1.07
SSM4P40318 SUP3tY(GUA)O 75 nt8.35□□□□□ -1.07
SSM4P40318 SNO4YMR322C 714 nt8.35□□□□□ -1.07
SSM4P40318 HSP33YOR391C 714 nt8.35□□□□□ -1.07
SSM4P40318 HSP32YPL280W 714 nt8.35□□□□□ -1.07
SSM4P40318 GAT1YFL021W 1533 nt8.35□□□□□ -1.07
SSM4P40318 VRP1YLR337C 2454 nt8.35□□□□□ -1.07
SSM4P40318 CSG2YBR036C 1233 nt8.34□□□□□ -1.07
SSM4P40318 YDL172CYDL172C 480 nt8.33□□□□□ -1.08
SSM4P40318 RME1YGR044C 903 nt8.33□□□□□ -1.08
SSM4P40318 NPA3YJR072C 1158 nt8.33□□□□□ -1.08
SSM4P40318 TAL1YLR354C 1008 nt8.33□□□□□ -1.08
SSM4P40318 YNR040WYNR040W 771 nt8.33□□□□□ -1.08
SSM4P40318 KNS1YLL019C 2214 nt8.33□□□□□ -1.08
SSM4P40318 DON1YDR273W 1098 nt8.32□□□□□ -1.08
SSM4P40318 YNR075C-AYNR075C-A 93 nt8.32□□□□□ -1.08
SSM4P40318 IFA38YBR159W 1044 nt8.32□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms