Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDNFP39905 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDNFP39905 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDNFP39905 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GDNFP39905 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDNFP39905 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDNFP39905 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.77■□□□□ 0.91
GDNFP39905 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GDNFP39905 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.76■□□□□ 0.91
GDNFP39905 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDNFP39905 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDNFP39905 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDNFP39905 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.76■□□□□ 0.91
GDNFP39905 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GDNFP39905 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDNFP39905 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDNFP39905 WHAMMP3-201ENST00000611636 1609 ntBASIC20.75■□□□□ 0.91
GDNFP39905 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDNFP39905 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GDNFP39905 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.75■□□□□ 0.91
GDNFP39905 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L13-201ENST00000554103 1267 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L15-201ENST00000611059 1267 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L23-201ENST00000615195 1269 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L24-201ENST00000617576 1269 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L22-201ENST00000618238 1269 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L20-201ENST00000619712 1269 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L21-201ENST00000622058 1269 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L10-201ENST00000622460 1267 ntBASIC20.75■□□□□ 0.91
GDNFP39905 DUX4L25-201ENST00000624915 1269 ntBASIC20.75■□□□□ 0.91
GDNFP39905 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
GDNFP39905 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDNFP39905 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDNFP39905 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDNFP39905 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDNFP39905 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
GDNFP39905 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDNFP39905 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GDNFP39905 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GDNFP39905 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDNFP39905 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.74■□□□□ 0.91
GDNFP39905 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.74■□□□□ 0.91
GDNFP39905 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
GDNFP39905 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
GDNFP39905 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDNFP39905 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDNFP39905 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDNFP39905 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.73■□□□□ 0.91
GDNFP39905 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDNFP39905 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDNFP39905 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
GDNFP39905 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDNFP39905 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.72■□□□□ 0.91
GDNFP39905 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GDNFP39905 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDNFP39905 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
GDNFP39905 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDNFP39905 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GDNFP39905 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GDNFP39905 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDNFP39905 AC068473.5-201ENST00000616428 2072 ntBASIC20.71■□□□□ 0.91
GDNFP39905 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDNFP39905 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDNFP39905 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.71■□□□□ 0.91
GDNFP39905 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
GDNFP39905 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GDNFP39905 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDNFP39905 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.7■□□□□ 0.9
GDNFP39905 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GDNFP39905 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GDNFP39905 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDNFP39905 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.69■□□□□ 0.9
GDNFP39905 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.69■□□□□ 0.9
GDNFP39905 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDNFP39905 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.69■□□□□ 0.9
GDNFP39905 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.69■□□□□ 0.9
GDNFP39905 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.69■□□□□ 0.9
GDNFP39905 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDNFP39905 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GDNFP39905 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GDNFP39905 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDNFP39905 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDNFP39905 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GDNFP39905 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDNFP39905 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GDNFP39905 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GDNFP39905 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
GDNFP39905 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDNFP39905 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDNFP39905 LINC01124-201ENST00000409786 2117 ntBASIC20.67■□□□□ 0.9
GDNFP39905 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GDNFP39905 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.67■□□□□ 0.9
GDNFP39905 CR559946.2-201ENST00000623684 991 ntBASIC20.66■□□□□ 0.9
GDNFP39905 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GDNFP39905 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
GDNFP39905 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDNFP39905 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDNFP39905 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDNFP39905 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GDNFP39905 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms