Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.81■□□□□ 0.92
ACKR3P25106 AC025884.2-201ENST00000553429 711 ntBASIC20.81■□□□□ 0.92
ACKR3P25106 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.81■□□□□ 0.92
ACKR3P25106 AC092296.2-201ENST00000589470 999 ntBASIC20.81■□□□□ 0.92
ACKR3P25106 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACKR3P25106 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
ACKR3P25106 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.8■□□□□ 0.92
ACKR3P25106 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.8■□□□□ 0.92
ACKR3P25106 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACKR3P25106 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.8■□□□□ 0.92
ACKR3P25106 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACKR3P25106 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACKR3P25106 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.79■□□□□ 0.92
ACKR3P25106 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ACKR3P25106 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACKR3P25106 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACKR3P25106 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.78■□□□□ 0.92
ACKR3P25106 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACKR3P25106 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACKR3P25106 MIR4449-201ENST00000578365 66 ntBASIC20.78■□□□□ 0.92
ACKR3P25106 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.78■□□□□ 0.92
ACKR3P25106 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACKR3P25106 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.77■□□□□ 0.92
ACKR3P25106 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACKR3P25106 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ACKR3P25106 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ACKR3P25106 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ACKR3P25106 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.77■□□□□ 0.92
ACKR3P25106 AC022413.1-201ENST00000624602 984 ntBASIC20.77■□□□□ 0.92
ACKR3P25106 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACKR3P25106 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ACKR3P25106 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ACKR3P25106 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ACKR3P25106 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACKR3P25106 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.76■□□□□ 0.91
ACKR3P25106 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ACKR3P25106 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACKR3P25106 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ACKR3P25106 SMPD5-203ENST00000639008 1464 ntBASIC20.75■□□□□ 0.91
ACKR3P25106 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ACKR3P25106 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACKR3P25106 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACKR3P25106 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACKR3P25106 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
ACKR3P25106 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ACKR3P25106 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ACKR3P25106 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ACKR3P25106 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ACKR3P25106 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.74■□□□□ 0.91
ACKR3P25106 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.74■□□□□ 0.91
ACKR3P25106 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ACKR3P25106 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ACKR3P25106 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ACKR3P25106 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.74■□□□□ 0.91
ACKR3P25106 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.73■□□□□ 0.91
ACKR3P25106 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACKR3P25106 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.73■□□□□ 0.91
ACKR3P25106 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACKR3P25106 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACKR3P25106 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ACKR3P25106 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ACKR3P25106 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.72■□□□□ 0.91
ACKR3P25106 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ACKR3P25106 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ACKR3P25106 ECEL1P2-201ENST00000461596 1295 ntBASIC20.72■□□□□ 0.91
ACKR3P25106 MIR3960-201ENST00000583311 91 ntBASIC20.72■□□□□ 0.91
ACKR3P25106 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ACKR3P25106 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACKR3P25106 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.71■□□□□ 0.91
ACKR3P25106 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACKR3P25106 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ACKR3P25106 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACKR3P25106 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACKR3P25106 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
ACKR3P25106 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ACKR3P25106 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ACKR3P25106 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACKR3P25106 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ACKR3P25106 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACKR3P25106 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.7■□□□□ 0.9
ACKR3P25106 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACKR3P25106 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACKR3P25106 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ACKR3P25106 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACKR3P25106 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACKR3P25106 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACKR3P25106 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.69■□□□□ 0.9
ACKR3P25106 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.69■□□□□ 0.9
ACKR3P25106 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACKR3P25106 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACKR3P25106 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
ACKR3P25106 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACKR3P25106 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACKR3P25106 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACKR3P25106 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACKR3P25106 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.68■□□□□ 0.9
ACKR3P25106 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.68■□□□□ 0.9
ACKR3P25106 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ACKR3P25106 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACKR3P25106 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms