Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBCP0CG48 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.98■□□□□ 0.95
UBCP0CG48 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.98■□□□□ 0.95
UBCP0CG48 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBCP0CG48 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBCP0CG48 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.97■□□□□ 0.95
UBCP0CG48 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBCP0CG48 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.97■□□□□ 0.95
UBCP0CG48 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.97■□□□□ 0.95
UBCP0CG48 CR559946.2-201ENST00000623684 991 ntBASIC20.97■□□□□ 0.95
UBCP0CG48 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBCP0CG48 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
UBCP0CG48 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
UBCP0CG48 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.96■□□□□ 0.95
UBCP0CG48 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.96■□□□□ 0.95
UBCP0CG48 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBCP0CG48 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBCP0CG48 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UBCP0CG48 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBCP0CG48 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.95■□□□□ 0.94
UBCP0CG48 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBCP0CG48 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBCP0CG48 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBCP0CG48 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBCP0CG48 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBCP0CG48 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.94■□□□□ 0.94
UBCP0CG48 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBCP0CG48 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBCP0CG48 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBCP0CG48 AC138932.3-201ENST00000567634 1902 ntBASIC20.93■□□□□ 0.94
UBCP0CG48 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UBCP0CG48 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.93■□□□□ 0.94
UBCP0CG48 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
UBCP0CG48 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
UBCP0CG48 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBCP0CG48 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBCP0CG48 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBCP0CG48 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.91■□□□□ 0.94
UBCP0CG48 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBCP0CG48 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBCP0CG48 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBCP0CG48 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBCP0CG48 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.9■□□□□ 0.94
UBCP0CG48 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBCP0CG48 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBCP0CG48 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBCP0CG48 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
UBCP0CG48 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBCP0CG48 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.89■□□□□ 0.93
UBCP0CG48 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBCP0CG48 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.89■□□□□ 0.93
UBCP0CG48 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBCP0CG48 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBCP0CG48 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBCP0CG48 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBCP0CG48 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.88■□□□□ 0.93
UBCP0CG48 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBCP0CG48 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
UBCP0CG48 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBCP0CG48 MIR3648-2-201ENST00000581792 180 ntBASIC20.87■□□□□ 0.93
UBCP0CG48 MIR3648-1-201ENST00000615959 180 ntBASIC20.87■□□□□ 0.93
UBCP0CG48 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBCP0CG48 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBCP0CG48 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 AC097639.1-201ENST00000565519 1891 ntBASIC20.86■□□□□ 0.93
UBCP0CG48 AL139125.2-201ENST00000623134 1869 ntBASIC20.86■□□□□ 0.93
UBCP0CG48 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.86■□□□□ 0.93
UBCP0CG48 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
UBCP0CG48 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.86■□□□□ 0.93
UBCP0CG48 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.86■□□□□ 0.93
UBCP0CG48 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBCP0CG48 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBCP0CG48 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBCP0CG48 ABHD17AP4-201ENST00000411545 909 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms