Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
MT-ND3P03897 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.29■■□□□ 1.48
MT-ND3P03897 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
MT-ND3P03897 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
MT-ND3P03897 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
MT-ND3P03897 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
MT-ND3P03897 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
MT-ND3P03897 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.28■■□□□ 1.48
MT-ND3P03897 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.28■■□□□ 1.48
MT-ND3P03897 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
MT-ND3P03897 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
MT-ND3P03897 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
MT-ND3P03897 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.28■■□□□ 1.48
MT-ND3P03897 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
MT-ND3P03897 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
MT-ND3P03897 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.27■■□□□ 1.48
MT-ND3P03897 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
MT-ND3P03897 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
MT-ND3P03897 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.27■■□□□ 1.48
MT-ND3P03897 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
MT-ND3P03897 RNF126P1-201ENST00000567452 1320 ntBASIC24.27■■□□□ 1.48
MT-ND3P03897 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
MT-ND3P03897 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.26■■□□□ 1.47
MT-ND3P03897 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
MT-ND3P03897 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
MT-ND3P03897 AC138932.3-201ENST00000567634 1902 ntBASIC24.26■■□□□ 1.47
MT-ND3P03897 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.26■■□□□ 1.47
MT-ND3P03897 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
MT-ND3P03897 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
MT-ND3P03897 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.26■■□□□ 1.47
MT-ND3P03897 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.25■■□□□ 1.47
MT-ND3P03897 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
MT-ND3P03897 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.25■■□□□ 1.47
MT-ND3P03897 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
MT-ND3P03897 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.25■■□□□ 1.47
MT-ND3P03897 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
MT-ND3P03897 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
MT-ND3P03897 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MT-ND3P03897 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
MT-ND3P03897 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MT-ND3P03897 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
MT-ND3P03897 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
MT-ND3P03897 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
MT-ND3P03897 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
MT-ND3P03897 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.23■■□□□ 1.47
MT-ND3P03897 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MT-ND3P03897 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.23■■□□□ 1.47
MT-ND3P03897 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
MT-ND3P03897 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MT-ND3P03897 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MT-ND3P03897 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MT-ND3P03897 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
MT-ND3P03897 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
MT-ND3P03897 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.22■■□□□ 1.47
MT-ND3P03897 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
MT-ND3P03897 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
MT-ND3P03897 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.22■■□□□ 1.47
MT-ND3P03897 ABHD17AP5-201ENST00000580133 923 ntBASIC24.22■■□□□ 1.47
MT-ND3P03897 AC022413.1-201ENST00000624602 984 ntBASIC24.22■■□□□ 1.47
MT-ND3P03897 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
MT-ND3P03897 AL139125.2-201ENST00000623134 1869 ntBASIC24.21■■□□□ 1.47
MT-ND3P03897 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MT-ND3P03897 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.21■■□□□ 1.47
MT-ND3P03897 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
MT-ND3P03897 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
MT-ND3P03897 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
MT-ND3P03897 AC096887.2-201ENST00000623443 1957 ntBASIC24.2■■□□□ 1.46
MT-ND3P03897 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
MT-ND3P03897 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.2■■□□□ 1.46
MT-ND3P03897 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
MT-ND3P03897 AC148477.6-201ENST00000623746 465 ntBASIC24.19■■□□□ 1.46
MT-ND3P03897 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.19■■□□□ 1.46
MT-ND3P03897 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.19■■□□□ 1.46
MT-ND3P03897 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
MT-ND3P03897 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MT-ND3P03897 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MT-ND3P03897 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.18■■□□□ 1.46
MT-ND3P03897 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
MT-ND3P03897 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
MT-ND3P03897 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MT-ND3P03897 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MT-ND3P03897 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
MT-ND3P03897 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MT-ND3P03897 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MT-ND3P03897 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
MT-ND3P03897 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
MT-ND3P03897 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
MT-ND3P03897 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MT-ND3P03897 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.17■■□□□ 1.46
MT-ND3P03897 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MT-ND3P03897 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.16■■□□□ 1.46
MT-ND3P03897 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
MT-ND3P03897 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MT-ND3P03897 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms