Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCAF4O95104 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.46■□□□□ 0.71
SCAF4O95104 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SCAF4O95104 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.45■□□□□ 0.7
SCAF4O95104 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCAF4O95104 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCAF4O95104 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.45■□□□□ 0.7
SCAF4O95104 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCAF4O95104 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.45■□□□□ 0.7
SCAF4O95104 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCAF4O95104 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCAF4O95104 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCAF4O95104 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCAF4O95104 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.44■□□□□ 0.7
SCAF4O95104 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.44■□□□□ 0.7
SCAF4O95104 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.44■□□□□ 0.7
SCAF4O95104 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCAF4O95104 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.44■□□□□ 0.7
SCAF4O95104 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCAF4O95104 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCAF4O95104 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.43■□□□□ 0.7
SCAF4O95104 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.43■□□□□ 0.7
SCAF4O95104 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCAF4O95104 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCAF4O95104 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCAF4O95104 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCAF4O95104 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCAF4O95104 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.42■□□□□ 0.7
SCAF4O95104 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCAF4O95104 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCAF4O95104 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SCAF4O95104 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCAF4O95104 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCAF4O95104 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCAF4O95104 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SCAF4O95104 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SCAF4O95104 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCAF4O95104 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCAF4O95104 AC110285.7-201ENST00000624417 1536 ntBASIC19.41■□□□□ 0.7
SCAF4O95104 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.4■□□□□ 0.7
SCAF4O95104 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SCAF4O95104 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCAF4O95104 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCAF4O95104 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.4■□□□□ 0.7
SCAF4O95104 LINC01971-201ENST00000617888 1048 ntBASIC19.4■□□□□ 0.7
SCAF4O95104 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SCAF4O95104 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCAF4O95104 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.4■□□□□ 0.7
SCAF4O95104 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAF4O95104 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAF4O95104 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCAF4O95104 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SCAF4O95104 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCAF4O95104 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SCAF4O95104 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SCAF4O95104 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCAF4O95104 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.39■□□□□ 0.69
SCAF4O95104 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SCAF4O95104 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCAF4O95104 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.39■□□□□ 0.69
SCAF4O95104 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAF4O95104 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAF4O95104 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAF4O95104 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCAF4O95104 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCAF4O95104 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCAF4O95104 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAF4O95104 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAF4O95104 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAF4O95104 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAF4O95104 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAF4O95104 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.37■□□□□ 0.69
SCAF4O95104 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SCAF4O95104 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SCAF4O95104 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.37■□□□□ 0.69
SCAF4O95104 AL139125.2-201ENST00000623134 1869 ntBASIC19.37■□□□□ 0.69
SCAF4O95104 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCAF4O95104 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCAF4O95104 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAF4O95104 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAF4O95104 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.36■□□□□ 0.69
SCAF4O95104 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAF4O95104 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.36■□□□□ 0.69
SCAF4O95104 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCAF4O95104 DUX4L11-201ENST00000611504 1267 ntBASIC19.36■□□□□ 0.69
SCAF4O95104 DUX4L12-201ENST00000614593 1267 ntBASIC19.36■□□□□ 0.69
SCAF4O95104 DUX4L14-201ENST00000621227 1267 ntBASIC19.36■□□□□ 0.69
SCAF4O95104 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SCAF4O95104 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCAF4O95104 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SCAF4O95104 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCAF4O95104 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.35■□□□□ 0.69
SCAF4O95104 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCAF4O95104 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCAF4O95104 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCAF4O95104 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCAF4O95104 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCAF4O95104 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.35■□□□□ 0.69
SCAF4O95104 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.35■□□□□ 0.69
SCAF4O95104 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms