Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLPXO76031 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLPXO76031 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.65■■□□□ 1.06
CLPXO76031 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLPXO76031 DUX4L28-201ENST00000623687 678 ntBASIC21.65■■□□□ 1.06
CLPXO76031 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLPXO76031 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.65■■□□□ 1.06
CLPXO76031 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLPXO76031 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLPXO76031 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLPXO76031 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLPXO76031 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLPXO76031 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.64■■□□□ 1.05
CLPXO76031 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLPXO76031 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.64■■□□□ 1.05
CLPXO76031 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPXO76031 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLPXO76031 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.63■■□□□ 1.05
CLPXO76031 ABHD17AP4-201ENST00000411545 909 ntBASIC21.63■■□□□ 1.05
CLPXO76031 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.63■■□□□ 1.05
CLPXO76031 AC142472.1-201ENST00000612013 1741 ntBASIC21.63■■□□□ 1.05
CLPXO76031 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.62■■□□□ 1.05
CLPXO76031 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.62■■□□□ 1.05
CLPXO76031 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.62■■□□□ 1.05
CLPXO76031 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLPXO76031 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLPXO76031 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPXO76031 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPXO76031 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPXO76031 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.61■■□□□ 1.05
CLPXO76031 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPXO76031 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPXO76031 AC044849.2-201ENST00000606596 710 ntBASIC21.61■■□□□ 1.05
CLPXO76031 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLPXO76031 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLPXO76031 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLPXO76031 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPXO76031 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLPXO76031 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLPXO76031 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLPXO76031 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.59■■□□□ 1.05
CLPXO76031 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.59■■□□□ 1.05
CLPXO76031 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.59■■□□□ 1.05
CLPXO76031 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.59■■□□□ 1.05
CLPXO76031 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
CLPXO76031 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLPXO76031 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.59■■□□□ 1.05
CLPXO76031 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLPXO76031 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.59■■□□□ 1.05
CLPXO76031 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.59■■□□□ 1.05
CLPXO76031 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLPXO76031 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLPXO76031 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.58■■□□□ 1.05
CLPXO76031 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLPXO76031 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.58■■□□□ 1.05
CLPXO76031 MIR7108-201ENST00000614319 87 ntBASIC21.58■■□□□ 1.05
CLPXO76031 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLPXO76031 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLPXO76031 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CLPXO76031 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLPXO76031 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLPXO76031 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLPXO76031 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CLPXO76031 AC096887.2-201ENST00000623443 1957 ntBASIC21.57■■□□□ 1.04
CLPXO76031 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CLPXO76031 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.57■■□□□ 1.04
CLPXO76031 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPXO76031 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.56■■□□□ 1.04
CLPXO76031 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.56■■□□□ 1.04
CLPXO76031 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.56■■□□□ 1.04
CLPXO76031 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLPXO76031 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPXO76031 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLPXO76031 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.56■■□□□ 1.04
CLPXO76031 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CLPXO76031 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.55■■□□□ 1.04
CLPXO76031 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CLPXO76031 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CLPXO76031 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLPXO76031 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms