Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF253O75346 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF253O75346 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF253O75346 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF253O75346 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF253O75346 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF253O75346 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF253O75346 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF253O75346 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF253O75346 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZNF253O75346 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF253O75346 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF253O75346 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF253O75346 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF253O75346 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF253O75346 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF253O75346 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF253O75346 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF253O75346 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF253O75346 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ZNF253O75346 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF253O75346 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF253O75346 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZNF253O75346 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ZNF253O75346 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF253O75346 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF253O75346 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF253O75346 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF253O75346 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF253O75346 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF253O75346 AC148477.6-201ENST00000623746 465 ntBASIC18.46■□□□□ 0.55
ZNF253O75346 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF253O75346 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF253O75346 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF253O75346 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF253O75346 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF253O75346 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF253O75346 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF253O75346 ERN1-208ENST00000606895 2068 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF253O75346 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L13-201ENST00000554103 1267 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L15-201ENST00000611059 1267 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L23-201ENST00000615195 1269 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L24-201ENST00000617576 1269 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L22-201ENST00000618238 1269 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L20-201ENST00000619712 1269 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L21-201ENST00000622058 1269 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L10-201ENST00000622460 1267 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 DUX4L25-201ENST00000624915 1269 ntBASIC18.45■□□□□ 0.54
ZNF253O75346 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF253O75346 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF253O75346 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF253O75346 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ZNF253O75346 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF253O75346 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
ZNF253O75346 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF253O75346 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF253O75346 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF253O75346 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF253O75346 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF253O75346 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF253O75346 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF253O75346 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF253O75346 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZNF253O75346 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF253O75346 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF253O75346 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 AC142381.3-201ENST00000568208 1670 ntBASIC18.41■□□□□ 0.54
ZNF253O75346 MIR219A2-201ENST00000608502 1504 ntBASIC18.41■□□□□ 0.54
ZNF253O75346 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.41■□□□□ 0.54
ZNF253O75346 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
ZNF253O75346 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF253O75346 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF253O75346 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF253O75346 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF253O75346 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF253O75346 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms