Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC138932.3-201ENST00000567634 1902 ntBASIC21.6■■□□□ 1.05
PFDN1O60925 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PFDN1O60925 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PFDN1O60925 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.6■■□□□ 1.05
PFDN1O60925 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.6■■□□□ 1.05
PFDN1O60925 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN1O60925 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PFDN1O60925 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PFDN1O60925 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN1O60925 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN1O60925 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN1O60925 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.59■■□□□ 1.05
PFDN1O60925 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.59■■□□□ 1.05
PFDN1O60925 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.58■■□□□ 1.05
PFDN1O60925 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN1O60925 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN1O60925 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PFDN1O60925 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN1O60925 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN1O60925 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.58■■□□□ 1.05
PFDN1O60925 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PFDN1O60925 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PFDN1O60925 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
PFDN1O60925 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PFDN1O60925 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
PFDN1O60925 AC097639.1-201ENST00000565519 1891 ntBASIC21.57■■□□□ 1.04
PFDN1O60925 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.57■■□□□ 1.04
PFDN1O60925 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.57■■□□□ 1.04
PFDN1O60925 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PFDN1O60925 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PFDN1O60925 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PFDN1O60925 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN1O60925 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN1O60925 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN1O60925 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN1O60925 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PFDN1O60925 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.55■■□□□ 1.04
PFDN1O60925 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN1O60925 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PFDN1O60925 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PFDN1O60925 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN1O60925 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN1O60925 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN1O60925 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PFDN1O60925 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN1O60925 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN1O60925 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PFDN1O60925 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN1O60925 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PFDN1O60925 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.53■■□□□ 1.04
PFDN1O60925 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.53■■□□□ 1.04
PFDN1O60925 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PFDN1O60925 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PFDN1O60925 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN1O60925 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN1O60925 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.52■■□□□ 1.04
PFDN1O60925 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PFDN1O60925 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN1O60925 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PFDN1O60925 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PFDN1O60925 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN1O60925 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN1O60925 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.51■■□□□ 1.03
PFDN1O60925 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PFDN1O60925 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PFDN1O60925 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PFDN1O60925 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PFDN1O60925 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PFDN1O60925 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PFDN1O60925 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PFDN1O60925 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.49■■□□□ 1.03
PFDN1O60925 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN1O60925 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN1O60925 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.48■■□□□ 1.03
PFDN1O60925 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN1O60925 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN1O60925 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PFDN1O60925 AC022211.4-201ENST00000625094 2161 ntBASIC21.47■■□□□ 1.03
PFDN1O60925 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PFDN1O60925 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PFDN1O60925 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.47■■□□□ 1.03
PFDN1O60925 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms