Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
XRCC2O43543 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRCC2O43543 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRCC2O43543 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
XRCC2O43543 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
XRCC2O43543 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.82■□□□□ 0.92
XRCC2O43543 AC096887.2-201ENST00000623443 1957 ntBASIC20.82■□□□□ 0.92
XRCC2O43543 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
XRCC2O43543 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.82■□□□□ 0.92
XRCC2O43543 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRCC2O43543 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRCC2O43543 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRCC2O43543 RP9P-202ENST00000450133 1212 ntBASIC20.81■□□□□ 0.92
XRCC2O43543 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
XRCC2O43543 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRCC2O43543 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
XRCC2O43543 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
XRCC2O43543 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XRCC2O43543 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XRCC2O43543 AC020928.2-201ENST00000588717 2197 ntBASIC20.79■□□□□ 0.92
XRCC2O43543 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRCC2O43543 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRCC2O43543 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
XRCC2O43543 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XRCC2O43543 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRCC2O43543 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XRCC2O43543 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
XRCC2O43543 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XRCC2O43543 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XRCC2O43543 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.78■□□□□ 0.92
XRCC2O43543 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
XRCC2O43543 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XRCC2O43543 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XRCC2O43543 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.78■□□□□ 0.92
XRCC2O43543 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XRCC2O43543 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.78■□□□□ 0.92
XRCC2O43543 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
XRCC2O43543 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
XRCC2O43543 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
XRCC2O43543 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
XRCC2O43543 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
XRCC2O43543 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
XRCC2O43543 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.77■□□□□ 0.92
XRCC2O43543 AC007029.1-201ENST00000604183 313 ntBASIC20.77■□□□□ 0.92
XRCC2O43543 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.77■□□□□ 0.92
XRCC2O43543 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
XRCC2O43543 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
XRCC2O43543 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
XRCC2O43543 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XRCC2O43543 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.76■□□□□ 0.91
XRCC2O43543 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
XRCC2O43543 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
XRCC2O43543 AC093536.1-201ENST00000569153 554 ntBASIC20.75■□□□□ 0.91
XRCC2O43543 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
XRCC2O43543 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XRCC2O43543 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XRCC2O43543 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XRCC2O43543 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.74■□□□□ 0.91
XRCC2O43543 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
XRCC2O43543 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XRCC2O43543 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.74■□□□□ 0.91
XRCC2O43543 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.74■□□□□ 0.91
XRCC2O43543 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.74■□□□□ 0.91
XRCC2O43543 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
XRCC2O43543 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.74■□□□□ 0.91
XRCC2O43543 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
XRCC2O43543 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XRCC2O43543 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.73■□□□□ 0.91
XRCC2O43543 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.73■□□□□ 0.91
XRCC2O43543 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
XRCC2O43543 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
XRCC2O43543 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XRCC2O43543 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
XRCC2O43543 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
XRCC2O43543 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XRCC2O43543 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.72■□□□□ 0.91
XRCC2O43543 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.72■□□□□ 0.91
XRCC2O43543 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.72■□□□□ 0.91
XRCC2O43543 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XRCC2O43543 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XRCC2O43543 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XRCC2O43543 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.71■□□□□ 0.91
XRCC2O43543 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
XRCC2O43543 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
XRCC2O43543 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XRCC2O43543 AC097639.1-201ENST00000565519 1891 ntBASIC20.71■□□□□ 0.91
XRCC2O43543 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRCC2O43543 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRCC2O43543 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRCC2O43543 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
XRCC2O43543 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
XRCC2O43543 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XRCC2O43543 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XRCC2O43543 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms