Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC34.31■■■■□ 3.08
CHD2O14647 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC34.3■■■■□ 3.08
CHD2O14647 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CHD2O14647 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CHD2O14647 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC34.3■■■■□ 3.08
CHD2O14647 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.3■■■■□ 3.08
CHD2O14647 AC120024.1-201ENST00000562672 995 ntBASIC34.3■■■■□ 3.08
CHD2O14647 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CHD2O14647 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC34.29■■■■□ 3.08
CHD2O14647 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
CHD2O14647 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.29■■■■□ 3.08
CHD2O14647 MIR4466-201ENST00000606121 54 ntBASIC34.28■■■■□ 3.08
CHD2O14647 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC34.28■■■■□ 3.08
CHD2O14647 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CHD2O14647 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CHD2O14647 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC34.27■■■■□ 3.08
CHD2O14647 QDPR-206ENST00000508623 601 ntTSL 3 BASIC34.27■■■■□ 3.08
CHD2O14647 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.27■■■■□ 3.08
CHD2O14647 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
CHD2O14647 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC34.26■■■■□ 3.08
CHD2O14647 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.26■■■■□ 3.08
CHD2O14647 AL512631.2-201ENST00000604634 923 ntBASIC34.26■■■■□ 3.08
CHD2O14647 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
CHD2O14647 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.25■■■■□ 3.07
CHD2O14647 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.25■■■■□ 3.07
CHD2O14647 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
CHD2O14647 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CHD2O14647 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CHD2O14647 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CHD2O14647 RARRES2P6-201ENST00000567333 442 ntBASIC34.24■■■■□ 3.07
CHD2O14647 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.23■■■■□ 3.07
CHD2O14647 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CHD2O14647 MIR3621-201ENST00000580529 85 ntBASIC34.23■■■■□ 3.07
CHD2O14647 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC34.23■■■■□ 3.07
CHD2O14647 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
CHD2O14647 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.22■■■■□ 3.07
CHD2O14647 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC34.22■■■■□ 3.07
CHD2O14647 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.22■■■■□ 3.07
CHD2O14647 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC34.22■■■■□ 3.07
CHD2O14647 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.22■■■■□ 3.07
CHD2O14647 MIR6724-1-201ENST00000616420 92 ntBASIC34.22■■■■□ 3.07
CHD2O14647 MIR6724-2-201ENST00000616483 92 ntBASIC34.22■■■■□ 3.07
CHD2O14647 MIR6724-4-201ENST00000617390 92 ntBASIC34.22■■■■□ 3.07
CHD2O14647 MIR6724-3-201ENST00000622482 92 ntBASIC34.22■■■■□ 3.07
CHD2O14647 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
CHD2O14647 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC34.2■■■■□ 3.07
CHD2O14647 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
CHD2O14647 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.07
CHD2O14647 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
CHD2O14647 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
CHD2O14647 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CHD2O14647 AC096631.2-201ENST00000436136 790 ntBASIC34.18■■■■□ 3.06
CHD2O14647 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC34.18■■■■□ 3.06
CHD2O14647 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
CHD2O14647 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.18■■■■□ 3.06
CHD2O14647 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.17■■■■□ 3.06
CHD2O14647 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
CHD2O14647 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.17■■■■□ 3.06
CHD2O14647 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
CHD2O14647 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
CHD2O14647 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
CHD2O14647 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC34.16■■■■□ 3.06
CHD2O14647 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.16■■■■□ 3.06
CHD2O14647 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
CHD2O14647 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC34.15■■■■□ 3.06
CHD2O14647 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CHD2O14647 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC34.15■■■■□ 3.06
CHD2O14647 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.14■■■■□ 3.06
CHD2O14647 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.14■■■■□ 3.06
CHD2O14647 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.14■■■■□ 3.06
CHD2O14647 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CHD2O14647 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC34.14■■■■□ 3.06
CHD2O14647 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
CHD2O14647 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC34.13■■■■□ 3.05
CHD2O14647 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC34.13■■■■□ 3.05
CHD2O14647 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.13■■■■□ 3.05
CHD2O14647 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
CHD2O14647 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC34.12■■■■□ 3.05
CHD2O14647 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
CHD2O14647 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC34.11■■■■□ 3.05
CHD2O14647 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC34.11■■■■□ 3.05
CHD2O14647 AC010997.5-201ENST00000609182 354 ntBASIC34.11■■■■□ 3.05
CHD2O14647 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC34.11■■■■□ 3.05
CHD2O14647 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CHD2O14647 GUK1-205ENST00000366722 850 ntTSL 3 BASIC34.1■■■■□ 3.05
CHD2O14647 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
CHD2O14647 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.09■■■■□ 3.05
CHD2O14647 AC133561.4-201ENST00000566112 224 ntBASIC34.09■■■■□ 3.05
CHD2O14647 MTDHP2-201ENST00000601468 714 ntBASIC34.09■■■■□ 3.05
CHD2O14647 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.09■■■■□ 3.05
CHD2O14647 ZNRF2P3-201ENST00000424200 374 ntBASIC34.09■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms