Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDX4O14627 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.64■■□□□ 1.38
CDX4O14627 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDX4O14627 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CDX4O14627 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CDX4O14627 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CDX4O14627 AL117332.1-201ENST00000622628 974 ntBASIC23.64■■□□□ 1.37
CDX4O14627 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDX4O14627 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.64■■□□□ 1.37
CDX4O14627 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.63■■□□□ 1.37
CDX4O14627 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDX4O14627 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CDX4O14627 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDX4O14627 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDX4O14627 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CDX4O14627 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.62■■□□□ 1.37
CDX4O14627 MIR3621-201ENST00000580529 85 ntBASIC23.62■■□□□ 1.37
CDX4O14627 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDX4O14627 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.61■■□□□ 1.37
CDX4O14627 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.61■■□□□ 1.37
CDX4O14627 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.61■■□□□ 1.37
CDX4O14627 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDX4O14627 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDX4O14627 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDX4O14627 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDX4O14627 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDX4O14627 AC096631.2-201ENST00000436136 790 ntBASIC23.6■■□□□ 1.37
CDX4O14627 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.6■■□□□ 1.37
CDX4O14627 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.6■■□□□ 1.37
CDX4O14627 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.6■■□□□ 1.37
CDX4O14627 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CDX4O14627 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDX4O14627 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDX4O14627 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDX4O14627 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDX4O14627 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDX4O14627 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDX4O14627 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDX4O14627 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDX4O14627 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CDX4O14627 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.58■■□□□ 1.37
CDX4O14627 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDX4O14627 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDX4O14627 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CDX4O14627 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDX4O14627 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CDX4O14627 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDX4O14627 AC010997.5-201ENST00000609182 354 ntBASIC23.57■■□□□ 1.36
CDX4O14627 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.57■■□□□ 1.36
CDX4O14627 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CDX4O14627 AC133561.4-201ENST00000566112 224 ntBASIC23.56■■□□□ 1.36
CDX4O14627 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CDX4O14627 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.56■■□□□ 1.36
CDX4O14627 MIR4466-201ENST00000606121 54 ntBASIC23.56■■□□□ 1.36
CDX4O14627 MIR6724-1-201ENST00000616420 92 ntBASIC23.56■■□□□ 1.36
CDX4O14627 MIR6724-2-201ENST00000616483 92 ntBASIC23.56■■□□□ 1.36
CDX4O14627 MIR6724-4-201ENST00000617390 92 ntBASIC23.56■■□□□ 1.36
CDX4O14627 MIR6724-3-201ENST00000622482 92 ntBASIC23.56■■□□□ 1.36
CDX4O14627 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.56■■□□□ 1.36
CDX4O14627 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.56■■□□□ 1.36
CDX4O14627 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDX4O14627 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CDX4O14627 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.56■■□□□ 1.36
CDX4O14627 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CDX4O14627 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDX4O14627 MIR4281-201ENST00000580852 62 ntBASIC23.54■■□□□ 1.36
CDX4O14627 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDX4O14627 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDX4O14627 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.53■■□□□ 1.36
CDX4O14627 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDX4O14627 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDX4O14627 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDX4O14627 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.52■■□□□ 1.36
CDX4O14627 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.52■■□□□ 1.36
CDX4O14627 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CDX4O14627 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.52■■□□□ 1.36
CDX4O14627 AL356740.2-201ENST00000601559 647 ntBASIC23.52■■□□□ 1.36
CDX4O14627 AC092666.2-201ENST00000613287 246 ntBASIC23.52■■□□□ 1.36
CDX4O14627 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CDX4O14627 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDX4O14627 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDX4O14627 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
CDX4O14627 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.5■■□□□ 1.35
CDX4O14627 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDX4O14627 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDX4O14627 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDX4O14627 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.49■■□□□ 1.35
CDX4O14627 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDX4O14627 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDX4O14627 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.49■■□□□ 1.35
CDX4O14627 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDX4O14627 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms