Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC01546A6NGU7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01546A6NGU7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01546A6NGU7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01546A6NGU7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01546A6NGU7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LINC01546A6NGU7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01546A6NGU7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LINC01546A6NGU7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01546A6NGU7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01546A6NGU7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01546A6NGU7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01546A6NGU7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01546A6NGU7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01546A6NGU7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LINC01546A6NGU7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01546A6NGU7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01546A6NGU7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01546A6NGU7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01546A6NGU7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01546A6NGU7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 SETD8P1-201ENST00000623146 1180 ntBASIC17.04■□□□□ 0.32
LINC01546A6NGU7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01546A6NGU7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01546A6NGU7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 SLC6A10P-202ENST00000431994 2058 ntBASIC17.02■□□□□ 0.32
LINC01546A6NGU7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01546A6NGU7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01546A6NGU7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LINC01546A6NGU7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC01546A6NGU7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01546A6NGU7 AL117328.2-201ENST00000624617 1940 ntBASIC17.02■□□□□ 0.31
LINC01546A6NGU7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01546A6NGU7 AC110285.7-201ENST00000624417 1536 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms