Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM235A6NFC5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 AL162393.1-201ENST00000437852 946 ntBASIC20.41■□□□□ 0.86
TMEM235A6NFC5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM235A6NFC5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM235A6NFC5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM235A6NFC5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM235A6NFC5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM235A6NFC5 LINC01124-201ENST00000409786 2117 ntBASIC20.4■□□□□ 0.86
TMEM235A6NFC5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEM235A6NFC5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM235A6NFC5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM235A6NFC5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.39■□□□□ 0.86
TMEM235A6NFC5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM235A6NFC5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM235A6NFC5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM235A6NFC5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM235A6NFC5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM235A6NFC5 DUX4L29-201ENST00000425409 679 ntBASIC20.38■□□□□ 0.85
TMEM235A6NFC5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.38■□□□□ 0.85
TMEM235A6NFC5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM235A6NFC5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM235A6NFC5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM235A6NFC5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TMEM235A6NFC5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM235A6NFC5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 AC133561.1-201ENST00000568600 2415 ntBASIC20.36■□□□□ 0.85
TMEM235A6NFC5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.36■□□□□ 0.85
TMEM235A6NFC5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM235A6NFC5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM235A6NFC5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM235A6NFC5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM235A6NFC5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM235A6NFC5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM235A6NFC5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM235A6NFC5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM235A6NFC5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
TMEM235A6NFC5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.33■□□□□ 0.85
TMEM235A6NFC5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TMEM235A6NFC5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TMEM235A6NFC5 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM235A6NFC5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.33■□□□□ 0.84
TMEM235A6NFC5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 AP003733.4-201ENST00000623785 1697 ntBASIC20.32■□□□□ 0.84
TMEM235A6NFC5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 MIR219A2-201ENST00000608502 1504 ntBASIC20.32■□□□□ 0.84
TMEM235A6NFC5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM235A6NFC5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM235A6NFC5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM235A6NFC5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TMEM235A6NFC5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM235A6NFC5 AL359504.2-201ENST00000605506 1601 ntBASIC20.31■□□□□ 0.84
TMEM235A6NFC5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM235A6NFC5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM235A6NFC5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM235A6NFC5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM235A6NFC5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM235A6NFC5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM235A6NFC5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms