Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
IGKV3D-7A0A0C4DH55 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IGKV3D-7A0A0C4DH55 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.04■□□□□ -0
IGKV3D-7A0A0C4DH55 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV3D-7A0A0C4DH55 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
IGKV3D-7A0A0C4DH55 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV3D-7A0A0C4DH55 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC15.02■□□□□ -0
IGKV3D-7A0A0C4DH55 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV3D-7A0A0C4DH55 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV3D-7A0A0C4DH55 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.02■□□□□ -0
IGKV3D-7A0A0C4DH55 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
IGKV3D-7A0A0C4DH55 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-7A0A0C4DH55 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-7A0A0C4DH55 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV3D-7A0A0C4DH55 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SLC25A24-204ENST00000569674 2357 ntBASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
IGKV3D-7A0A0C4DH55 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV3D-7A0A0C4DH55 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV3D-7A0A0C4DH55 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV3D-7A0A0C4DH55 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV3D-7A0A0C4DH55 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
IGKV3D-7A0A0C4DH55 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV3D-7A0A0C4DH55 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV3D-7A0A0C4DH55 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV3D-7A0A0C4DH55 AC138932.3-201ENST00000567634 1902 ntBASIC14.96□□□□□ -0.02
IGKV3D-7A0A0C4DH55 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
IGKV3D-7A0A0C4DH55 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV3D-7A0A0C4DH55 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV3D-7A0A0C4DH55 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV3D-7A0A0C4DH55 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV3D-7A0A0C4DH55 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms