Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV24A0A0B4J272 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRAV24A0A0B4J272 AC092296.2-201ENST00000589470 999 ntBASIC20.17■□□□□ 0.82
TRAV24A0A0B4J272 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.16■□□□□ 0.82
TRAV24A0A0B4J272 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV24A0A0B4J272 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV24A0A0B4J272 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAV24A0A0B4J272 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 SMPD5-203ENST00000639008 1464 ntBASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV24A0A0B4J272 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 AC022211.4-201ENST00000625094 2161 ntBASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV24A0A0B4J272 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 AC142381.3-201ENST00000568208 1670 ntBASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 MIR3960-201ENST00000583311 91 ntBASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV24A0A0B4J272 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 AC022413.1-201ENST00000624602 984 ntBASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAV24A0A0B4J272 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV24A0A0B4J272 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV24A0A0B4J272 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV24A0A0B4J272 ECEL1P2-201ENST00000461596 1295 ntBASIC20.1■□□□□ 0.81
TRAV24A0A0B4J272 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV24A0A0B4J272 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRAV24A0A0B4J272 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV24A0A0B4J272 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV24A0A0B4J272 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV24A0A0B4J272 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRAV24A0A0B4J272 AC097639.1-201ENST00000565519 1891 ntBASIC20.09■□□□□ 0.81
TRAV24A0A0B4J272 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV24A0A0B4J272 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAV24A0A0B4J272 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV24A0A0B4J272 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV24A0A0B4J272 MIR4449-201ENST00000578365 66 ntBASIC20.08■□□□□ 0.81
TRAV24A0A0B4J272 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRAV24A0A0B4J272 AC138932.3-201ENST00000567634 1902 ntBASIC20.08■□□□□ 0.8
TRAV24A0A0B4J272 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV24A0A0B4J272 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV24A0A0B4J272 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV24A0A0B4J272 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV24A0A0B4J272 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV24A0A0B4J272 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV24A0A0B4J272 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV24A0A0B4J272 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV24A0A0B4J272 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRAV24A0A0B4J272 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRAV24A0A0B4J272 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV24A0A0B4J272 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms