Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV41A0A0B4J266 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV41A0A0B4J266 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV41A0A0B4J266 AC129492.7-201ENST00000622992 756 ntBASIC18.92■□□□□ 0.62
TRAV41A0A0B4J266 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV41A0A0B4J266 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV41A0A0B4J266 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV41A0A0B4J266 AC091060.1-201ENST00000623524 1766 ntBASIC18.91■□□□□ 0.62
TRAV41A0A0B4J266 DUX4L9-201ENST00000449051 1259 ntBASIC18.91■□□□□ 0.62
TRAV41A0A0B4J266 ERN1-208ENST00000606895 2068 ntBASIC18.91■□□□□ 0.62
TRAV41A0A0B4J266 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV41A0A0B4J266 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV41A0A0B4J266 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 AC012354.3-201ENST00000623734 483 ntBASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV41A0A0B4J266 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 KRT18P10-201ENST00000388836 1287 ntBASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 MIR6765-201ENST00000614092 87 ntBASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 AC010501.1-201ENST00000606270 1962 ntBASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV41A0A0B4J266 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV41A0A0B4J266 AC145676.1-201ENST00000514988 2004 ntBASIC18.88■□□□□ 0.61
TRAV41A0A0B4J266 SPCS2P3-201ENST00000500401 656 ntBASIC18.88■□□□□ 0.61
TRAV41A0A0B4J266 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV41A0A0B4J266 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV41A0A0B4J266 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV41A0A0B4J266 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV41A0A0B4J266 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV41A0A0B4J266 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAV41A0A0B4J266 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV41A0A0B4J266 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV41A0A0B4J266 DUSP8P4-201ENST00000399538 1761 ntBASIC18.86■□□□□ 0.61
TRAV41A0A0B4J266 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV41A0A0B4J266 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 AC004987.1-201ENST00000428627 508 ntBASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 ATP5G2P3-201ENST00000429083 425 ntBASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV41A0A0B4J266 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV41A0A0B4J266 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV41A0A0B4J266 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV41A0A0B4J266 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV41A0A0B4J266 TSPY13P-201ENST00000338964 914 ntBASIC18.84■□□□□ 0.61
TRAV41A0A0B4J266 DUX4L18-201ENST00000553347 1267 ntBASIC18.84■□□□□ 0.61
TRAV41A0A0B4J266 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV41A0A0B4J266 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV41A0A0B4J266 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRAV41A0A0B4J266 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV41A0A0B4J266 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV41A0A0B4J266 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.82■□□□□ 0.6
TRAV41A0A0B4J266 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 AC096887.2-201ENST00000623443 1957 ntBASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 AL033527.3-201ENST00000566366 1196 ntBASIC18.81■□□□□ 0.6
TRAV41A0A0B4J266 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms