Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 AC018755.3-202ENST00000596210 929 ntBASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV38-1A0A0B4J264 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRAV38-1A0A0B4J264 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 KRT18P10-201ENST00000388836 1287 ntBASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV38-1A0A0B4J264 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV38-1A0A0B4J264 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV38-1A0A0B4J264 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAV38-1A0A0B4J264 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV38-1A0A0B4J264 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV38-1A0A0B4J264 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 AC092803.2-201ENST00000564287 1899 ntBASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 AC129492.7-201ENST00000622992 756 ntBASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV38-1A0A0B4J264 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRAV38-1A0A0B4J264 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAV38-1A0A0B4J264 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRAV38-1A0A0B4J264 AC012354.3-201ENST00000623734 483 ntBASIC20.17■□□□□ 0.82
TRAV38-1A0A0B4J264 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV38-1A0A0B4J264 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV38-1A0A0B4J264 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV38-1A0A0B4J264 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV38-1A0A0B4J264 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV38-1A0A0B4J264 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRAV38-1A0A0B4J264 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV38-1A0A0B4J264 MIR6765-201ENST00000614092 87 ntBASIC20.15■□□□□ 0.82
TRAV38-1A0A0B4J264 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TRAV38-1A0A0B4J264 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRAV38-1A0A0B4J264 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV38-1A0A0B4J264 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.14■□□□□ 0.82
TRAV38-1A0A0B4J264 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 DUX4L9-201ENST00000449051 1259 ntBASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV38-1A0A0B4J264 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV38-1A0A0B4J264 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV38-1A0A0B4J264 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAV38-1A0A0B4J264 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRAV38-1A0A0B4J264 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV38-1A0A0B4J264 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRAV38-1A0A0B4J264 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 TSPY13P-201ENST00000338964 914 ntBASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 ATP5G2P3-201ENST00000429083 425 ntBASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 SPCS2P3-201ENST00000500401 656 ntBASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 AC010501.1-201ENST00000606270 1962 ntBASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV38-1A0A0B4J264 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 AC004987.1-201ENST00000428627 508 ntBASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV38-1A0A0B4J264 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 AC091060.1-201ENST00000623524 1766 ntBASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms