Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRAV5A0A0B4J249 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 AL359504.2-201ENST00000605506 1601 ntBASIC18.56■□□□□ 0.56
TRAV5A0A0B4J249 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV5A0A0B4J249 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 AL359258.2-201ENST00000564063 1566 ntBASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV5A0A0B4J249 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 LINC01124-201ENST00000409786 2117 ntBASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV5A0A0B4J249 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV5A0A0B4J249 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV5A0A0B4J249 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV5A0A0B4J249 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV5A0A0B4J249 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV5A0A0B4J249 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV5A0A0B4J249 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV5A0A0B4J249 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 AC008813.1-201ENST00000536597 885 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L13-201ENST00000554103 1267 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L15-201ENST00000611059 1267 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L23-201ENST00000615195 1269 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L24-201ENST00000617576 1269 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 LINC01971-201ENST00000617888 1048 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L22-201ENST00000618238 1269 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L20-201ENST00000619712 1269 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L21-201ENST00000622058 1269 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L10-201ENST00000622460 1267 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 DUX4L25-201ENST00000624915 1269 ntBASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV5A0A0B4J249 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV5A0A0B4J249 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 AC148477.6-201ENST00000623746 465 ntBASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV5A0A0B4J249 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV5A0A0B4J249 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 HLA-V-202ENST00000446817 847 ntBASIC18.47■□□□□ 0.55
TRAV5A0A0B4J249 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms