Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 AL691403.2-201ENST00000618460 490 ntBASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RPH3AQ9Y2J0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 PMS2P2-201ENST00000425039 1128 ntBASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 UNC93B6-202ENST00000528242 690 ntBASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 PGM5P2-202ENST00000637225 1043 ntBASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AL590787.1-201ENST00000568856 1315 ntBASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 PI4KAP1-204ENST00000612579 1703 ntBASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 AC093525.9-201ENST00000624961 1746 ntBASIC15.6■□□□□ 0.09
RPH3AQ9Y2J0 GPR89P-201ENST00000407924 1495 ntBASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 MIR940-201ENST00000401276 94 ntBASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 AC068418.2-201ENST00000577309 3703 ntBASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ZNF259P1-201ENST00000407656 1365 ntBASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RPH3AQ9Y2J0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms