Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.03■■□□□ 1.28
NINLQ9Y2I6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 Z92544.3-201ENST00000624747 417 ntBASIC23.03■■□□□ 1.28
NINLQ9Y2I6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NINLQ9Y2I6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 FAM58DP-201ENST00000428076 619 ntBASIC23.02■■□□□ 1.28
NINLQ9Y2I6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 AL139011.1-202ENST00000642063 584 ntBASIC23.02■■□□□ 1.28
NINLQ9Y2I6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NINLQ9Y2I6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.27
NINLQ9Y2I6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 CNN2P2-201ENST00000443536 909 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 CNN2P3-201ENST00000450201 906 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AC067863.1-201ENST00000494933 530 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AP002490.2-201ENST00000524791 560 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AP000842.3-202ENST00000569238 1080 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AC073389.1-201ENST00000595595 795 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AL136317.3-201ENST00000618497 906 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 MIR346-201ENST00000362234 95 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 SPDYE14P-201ENST00000442619 822 ntBASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC23.01■■□□□ 1.27
NINLQ9Y2I6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23■■□□□ 1.27
NINLQ9Y2I6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC23■■□□□ 1.27
NINLQ9Y2I6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC23■■□□□ 1.27
NINLQ9Y2I6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC23■■□□□ 1.27
NINLQ9Y2I6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
NINLQ9Y2I6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC23■■□□□ 1.27
NINLQ9Y2I6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NINLQ9Y2I6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
NINLQ9Y2I6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23■■□□□ 1.27
NINLQ9Y2I6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms