Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GGTLC5P-201ENST00000617623 998 ntBASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA1Q9UND3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AC016396.2-201ENST00000562575 1417 ntBASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AP002414.1-201ENST00000391405 1147 ntBASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 ALG1L5P-201ENST00000482043 771 ntBASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 MIR4469-201ENST00000583919 79 ntBASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.68■□□□□ 0.1
NPIPA1Q9UND3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 SNHG9-202ENST00000564014 471 ntBASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 AL078644.1-201ENST00000609881 752 ntBASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 C20orf181-201ENST00000623918 480 ntBASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 PI4KAP1-204ENST00000612579 1703 ntBASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPA1Q9UND3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms