Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TLR9Q9NR96 ABALON-201ENST00000629058 1903 ntBASIC17.92■□□□□ 0.46
TLR9Q9NR96 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TLR9Q9NR96 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 AP005018.1-201ENST00000525475 301 ntBASIC17.91■□□□□ 0.46
TLR9Q9NR96 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 AC027307.3-201ENST00000594262 1100 ntBASIC17.91■□□□□ 0.46
TLR9Q9NR96 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.91■□□□□ 0.46
TLR9Q9NR96 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TLR9Q9NR96 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 AL358472.5-202ENST00000641448 1267 ntBASIC17.9■□□□□ 0.46
TLR9Q9NR96 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 AC067852.2-201ENST00000590513 2313 ntBASIC17.9■□□□□ 0.46
TLR9Q9NR96 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.9■□□□□ 0.46
TLR9Q9NR96 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TLR9Q9NR96 TOP3BP1-201ENST00000420768 1380 ntBASIC17.9■□□□□ 0.46
TLR9Q9NR96 SLC22A20-204ENST00000530038 1673 ntBASIC17.9■□□□□ 0.46
TLR9Q9NR96 AC016027.1-202ENST00000607927 1699 ntBASIC17.9■□□□□ 0.46
TLR9Q9NR96 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TLR9Q9NR96 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TLR9Q9NR96 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.89■□□□□ 0.46
TLR9Q9NR96 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.89■□□□□ 0.46
TLR9Q9NR96 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 AC022494.1-201ENST00000466044 728 ntBASIC17.89■□□□□ 0.45
TLR9Q9NR96 AC004890.2-204ENST00000481968 304 ntBASIC17.89■□□□□ 0.45
TLR9Q9NR96 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 MEIS3P1-201ENST00000495167 958 ntBASIC17.89■□□□□ 0.45
TLR9Q9NR96 SERBP1P5-201ENST00000510079 1181 ntBASIC17.89■□□□□ 0.45
TLR9Q9NR96 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 AP001350.2-201ENST00000625104 1094 ntBASIC17.89■□□□□ 0.45
TLR9Q9NR96 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TLR9Q9NR96 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.89■□□□□ 0.45
TLR9Q9NR96 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.88■□□□□ 0.45
TLR9Q9NR96 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR9Q9NR96 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms