Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VTA1Q9NP79 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 AC002472.2-201ENST00000442739 958 ntBASIC18.85■□□□□ 0.61
VTA1Q9NP79 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 AC108860.2-201ENST00000562760 2183 ntBASIC18.85■□□□□ 0.61
VTA1Q9NP79 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.85■□□□□ 0.61
VTA1Q9NP79 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VTA1Q9NP79 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 LINC02012-201ENST00000608206 1725 ntBASIC18.84■□□□□ 0.61
VTA1Q9NP79 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 AC236430.1-201ENST00000402231 743 ntBASIC18.84■□□□□ 0.61
VTA1Q9NP79 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 FAM207CP-201ENST00000443486 507 ntBASIC18.84■□□□□ 0.61
VTA1Q9NP79 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 TERF1P3-201ENST00000505638 1227 ntBASIC18.84■□□□□ 0.61
VTA1Q9NP79 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 RN7SL204P-201ENST00000582831 262 ntBASIC18.84■□□□□ 0.61
VTA1Q9NP79 MIR4453-201ENST00000584019 89 ntBASIC18.84■□□□□ 0.61
VTA1Q9NP79 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VTA1Q9NP79 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
VTA1Q9NP79 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
VTA1Q9NP79 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.83■□□□□ 0.61
VTA1Q9NP79 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VTA1Q9NP79 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
VTA1Q9NP79 TUBB8P12-201ENST00000308911 1335 ntBASIC18.83■□□□□ 0.61
VTA1Q9NP79 TUBB7P-202ENST00000428444 1305 ntBASIC18.83■□□□□ 0.61
VTA1Q9NP79 TUBB8P7-204ENST00000567960 1332 ntBASIC18.83■□□□□ 0.61
VTA1Q9NP79 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
VTA1Q9NP79 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 AC092580.3-201ENST00000430932 139 ntBASIC18.83■□□□□ 0.6
VTA1Q9NP79 UGT1A2P-201ENST00000454886 866 ntBASIC18.83■□□□□ 0.6
VTA1Q9NP79 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 AC239800.4-201ENST00000603712 296 ntBASIC18.83■□□□□ 0.6
VTA1Q9NP79 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 HCG11-201ENST00000411553 5696 ntBASIC18.83■□□□□ 0.6
VTA1Q9NP79 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.83■□□□□ 0.6
VTA1Q9NP79 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VTA1Q9NP79 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms