Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 Z99916.2-201ENST00000604037 246 ntBASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 OR2I1P-210ENST00000642037 4691 ntBASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SND1-IT1Q9HBX3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY12P-201ENST00000421279 868 ntBASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY7P-201ENST00000431358 1114 ntBASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 AC034232.1-201ENST00000506026 1064 ntBASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SND1-IT1Q9HBX3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 AC092364.2-201ENST00000596710 2692 ntBASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms