Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 AC006538.1-201ENST00000567905 1585 ntBASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
KRTAP3-1Q9BYR8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AC073508.3-201ENST00000619697 1419 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AC087499.1-201ENST00000418141 1075 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 BX664615.1-201ENST00000443558 458 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AC112907.2-201ENST00000448639 330 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AL451064.1-201ENST00000607718 471 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AL109924.4-201ENST00000623089 670 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 TMEM191A-211ENST00000637163 1067 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 AL513477.1-201ENST00000602865 2407 ntBASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
KRTAP3-1Q9BYR8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC8.63□□□□□ -1.03
KRTAP3-1Q9BYR8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms