Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AC004832.2-201ENST00000426397 482 ntBASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 KRT18P2-201ENST00000447938 1258 ntBASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AC087163.2-201ENST00000457299 853 ntBASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AC018845.2-201ENST00000568326 409 ntBASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 MIR3687-2-201ENST00000577708 61 ntBASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 MIR3687-1-201ENST00000614492 61 ntBASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP3Q9BWW4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 IGLL3P-201ENST00000412472 434 ntBASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 AC096734.2-201ENST00000562054 433 ntBASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 OR7E47P-204ENST00000575924 449 ntBASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 AC010507.1-201ENST00000633895 436 ntBASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 AC093525.9-201ENST00000624961 1746 ntBASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 EGFEM1P-202ENST00000431685 1563 ntBASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.17□□□□□ -0.14
SSBP3Q9BWW4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 YBX2P1-201ENST00000394192 760 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms