Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USB1Q9BQ65 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
USB1Q9BQ65 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 MIR574-201ENST00000385209 96 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 AC092910.1-201ENST00000482027 1129 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 Z83851.2-201ENST00000609564 659 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 AC027601.4-201ENST00000611259 610 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 FAM197Y3-203ENST00000618346 717 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 AC022211.2-201ENST00000585075 2527 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 OR6D1P-203ENST00000641209 4860 ntBASIC15.24■□□□□ 0.03
USB1Q9BQ65 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
USB1Q9BQ65 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.24■□□□□ 0.03
USB1Q9BQ65 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
USB1Q9BQ65 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USB1Q9BQ65 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.23■□□□□ 0.03
USB1Q9BQ65 ACTG1P4-201ENST00000425123 1122 ntBASIC15.23■□□□□ 0.03
USB1Q9BQ65 AC098831.1-202ENST00000438821 336 ntBASIC15.23■□□□□ 0.03
USB1Q9BQ65 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms