Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
VGLL1Q99990 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 AC211429.1-201ENST00000415277 523 ntBASIC12.92□□□□□ -0.34
VGLL1Q99990 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
VGLL1Q99990 AL845331.1-201ENST00000424978 1190 ntBASIC12.92□□□□□ -0.34
VGLL1Q99990 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.92□□□□□ -0.34
VGLL1Q99990 STK19B-204ENST00000512515 211 ntBASIC12.92□□□□□ -0.34
VGLL1Q99990 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.92□□□□□ -0.34
VGLL1Q99990 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 IGHV3-41-201ENST00000613121 348 ntBASIC12.92□□□□□ -0.34
VGLL1Q99990 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.92□□□□□ -0.34
VGLL1Q99990 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
VGLL1Q99990 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.92□□□□□ -0.34
VGLL1Q99990 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VGLL1Q99990 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 AC009336.1-201ENST00000608941 1553 ntBASIC12.91□□□□□ -0.34
VGLL1Q99990 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 PCDHB17P-201ENST00000539533 2393 ntBASIC12.91□□□□□ -0.34
VGLL1Q99990 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.91□□□□□ -0.34
VGLL1Q99990 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.91□□□□□ -0.34
VGLL1Q99990 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.91□□□□□ -0.34
VGLL1Q99990 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 AL353801.3-201ENST00000609898 542 ntBASIC12.91□□□□□ -0.34
VGLL1Q99990 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 GPR89P-201ENST00000407924 1495 ntBASIC12.91□□□□□ -0.34
VGLL1Q99990 AL353593.2-201ENST00000602529 1483 ntBASIC12.91□□□□□ -0.34
VGLL1Q99990 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
VGLL1Q99990 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
VGLL1Q99990 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VGLL1Q99990 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms