Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 AC013268.4-201ENST00000637413 2228 ntBASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 CD99P1-205ENST00000527459 561 ntBASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 MIR6786-201ENST00000616843 113 ntBASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 AC096733.2-201ENST00000609937 1394 ntBASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IPQ96QF0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 KRT18P29-201ENST00000397031 1267 ntBASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 AC239809.2-201ENST00000415381 517 ntBASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 B3GAT3P1-201ENST00000471720 806 ntBASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 AC026366.1-201ENST00000488803 879 ntBASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 AC008403.3-201ENST00000598924 454 ntBASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IPQ96QF0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IPQ96QF0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 CR392000.1-201ENST00000624770 1228 ntBASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IPQ96QF0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms