Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 AC016734.2-201ENST00000624325 1377 ntBASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 AL365203.3-201ENST00000609742 2057 ntBASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 SPDYE21P-201ENST00000413323 827 ntBASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC44A1Q8WWI5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 AC005052.1-201ENST00000625181 2492 ntBASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 BNIP3P18-201ENST00000593976 575 ntBASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 AL139011.1-202ENST00000642063 584 ntBASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC44A1Q8WWI5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 KRT8P49-201ENST00000604166 1432 ntBASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 AC097637.2-201ENST00000624096 1997 ntBASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.31
SLC44A1Q8WWI5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 ARMC10P1-201ENST00000313754 855 ntBASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC44A1Q8WWI5 RCN1P2-201ENST00000398357 915 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms