Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 NCF1C-201ENST00000438382 1427 ntBASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 TUBB8P12-201ENST00000308911 1335 ntBASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 TUBB7P-202ENST00000428444 1305 ntBASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 TUBB8P7-204ENST00000567960 1332 ntBASIC17.72■□□□□ 0.43
TRAF3IP1Q8TDR0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 PRYP5-201ENST00000451909 266 ntBASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 NKAPP1-205ENST00000585790 367 ntBASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAF3IP1Q8TDR0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.71■□□□□ 0.42
TRAF3IP1Q8TDR0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.71■□□□□ 0.42
TRAF3IP1Q8TDR0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 FLJ38576-201ENST00000623820 2459 ntBASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 AP002490.2-201ENST00000524791 560 ntBASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAF3IP1Q8TDR0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 RNF216P1-203ENST00000404404 2427 ntBASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TRAF3IP1Q8TDR0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms