Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 TPSP2-201ENST00000561760 610 ntBASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 AP002414.4-201ENST00000589764 1148 ntBASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS37AQ8NEZ2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 RCN1P2-201ENST00000398357 915 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 AC104819.1-201ENST00000504587 486 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 AC087388.1-201ENST00000571370 1112 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 AC114341.1-201ENST00000618070 349 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 IER3-202ENST00000376377 1350 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 UBALD1-205ENST00000590891 2641 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 AL021920.2-201ENST00000624828 1351 ntBASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS37AQ8NEZ2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 IGHV3-47-201ENST00000425060 335 ntBASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 BNIP3P18-201ENST00000593976 575 ntBASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 AP000867.4-201ENST00000641616 219 ntBASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS37AQ8NEZ2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS37AQ8NEZ2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS37AQ8NEZ2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms