Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 RPS2P1-201ENST00000434010 821 ntBASIC16.11■□□□□ 0.17
PSD4Q8NDX1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 AL049840.3-201ENST00000602669 611 ntBASIC16.11■□□□□ 0.17
PSD4Q8NDX1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
PSD4Q8NDX1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 SPDYE21P-201ENST00000413323 827 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 BX005266.1-201ENST00000473402 457 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 OR7E14P-202ENST00000530490 1290 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 AC139887.3-201ENST00000568585 713 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 AL022326.1-202ENST00000641533 845 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 IL9RP2-201ENST00000423948 1312 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 FLJ38576-201ENST00000623820 2459 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 AC243591.1-201ENST00000452967 1364 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 SIGLEC16-201ENST00000599858 1437 ntBASIC16.1■□□□□ 0.17
PSD4Q8NDX1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
PSD4Q8NDX1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.09■□□□□ 0.17
PSD4Q8NDX1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms