Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF439Q8NDP4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 AC004817.3-201ENST00000602957 2129 ntBASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 AC106795.1-205ENST00000512851 1056 ntBASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 MIR3652-201ENST00000579335 131 ntBASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF439Q8NDP4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 GPR89P-201ENST00000407924 1495 ntBASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 FRMD8P1-201ENST00000440433 1524 ntBASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF439Q8NDP4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms