Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SIX5Q8N196 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 ARSEP1-201ENST00000420443 635 ntBASIC17.34■□□□□ 0.37
SIX5Q8N196 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.34■□□□□ 0.37
SIX5Q8N196 AC022494.1-201ENST00000466044 728 ntBASIC17.34■□□□□ 0.37
SIX5Q8N196 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
SIX5Q8N196 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.34■□□□□ 0.37
SIX5Q8N196 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SIX5Q8N196 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.34■□□□□ 0.37
SIX5Q8N196 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SIX5Q8N196 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.34■□□□□ 0.37
SIX5Q8N196 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.34■□□□□ 0.37
SIX5Q8N196 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SIX5Q8N196 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 AC012569.1-201ENST00000591191 1524 ntBASIC17.34■□□□□ 0.37
SIX5Q8N196 AC079416.2-201ENST00000625035 1193 ntBASIC17.34■□□□□ 0.37
SIX5Q8N196 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.34■□□□□ 0.37
SIX5Q8N196 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SIX5Q8N196 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX5Q8N196 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX5Q8N196 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX5Q8N196 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SIX5Q8N196 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.33■□□□□ 0.37
SIX5Q8N196 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SIX5Q8N196 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIX5Q8N196 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.33■□□□□ 0.36
SIX5Q8N196 AC100757.3-201ENST00000622361 1406 ntBASIC17.33■□□□□ 0.36
SIX5Q8N196 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SIX5Q8N196 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.33■□□□□ 0.36
SIX5Q8N196 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.33■□□□□ 0.36
SIX5Q8N196 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.33■□□□□ 0.36
SIX5Q8N196 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.33■□□□□ 0.36
SIX5Q8N196 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SIX5Q8N196 AC005412.3-201ENST00000580309 715 ntBASIC17.33■□□□□ 0.36
SIX5Q8N196 AC073592.8-201ENST00000624126 511 ntBASIC17.33■□□□□ 0.36
SIX5Q8N196 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SIX5Q8N196 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.33■□□□□ 0.36
SIX5Q8N196 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIX5Q8N196 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.32■□□□□ 0.36
SIX5Q8N196 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.32■□□□□ 0.36
SIX5Q8N196 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 WASH6P-202ENST00000359512 1437 ntBASIC17.32■□□□□ 0.36
SIX5Q8N196 CU639417.3-201ENST00000624240 1404 ntBASIC17.32■□□□□ 0.36
SIX5Q8N196 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SIX5Q8N196 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SIX5Q8N196 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SIX5Q8N196 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.32■□□□□ 0.36
SIX5Q8N196 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.32■□□□□ 0.36
SIX5Q8N196 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SIX5Q8N196 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.32■□□□□ 0.36
SIX5Q8N196 AP000842.3-202ENST00000569238 1080 ntBASIC17.32■□□□□ 0.36
SIX5Q8N196 AL590560.3-201ENST00000623350 461 ntBASIC17.32■□□□□ 0.36
SIX5Q8N196 AC008267.7-201ENST00000624570 1194 ntBASIC17.32■□□□□ 0.36
SIX5Q8N196 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SIX5Q8N196 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SIX5Q8N196 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.32■□□□□ 0.36
SIX5Q8N196 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 AP000997.3-201ENST00000623333 2250 ntBASIC17.32■□□□□ 0.36
SIX5Q8N196 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIX5Q8N196 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SIX5Q8N196 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SIX5Q8N196 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SIX5Q8N196 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms