Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.71■□□□□ 0.1
VRK2Q86Y07 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.71■□□□□ 0.1
VRK2Q86Y07 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VRK2Q86Y07 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 AL662844.4-201ENST00000606367 2838 ntBASIC15.7■□□□□ 0.1
VRK2Q86Y07 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 AP002490.2-201ENST00000524791 560 ntBASIC15.7■□□□□ 0.1
VRK2Q86Y07 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 AL139288.1-201ENST00000623748 933 ntBASIC15.7■□□□□ 0.1
VRK2Q86Y07 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VRK2Q86Y07 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
VRK2Q86Y07 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 TSPY19P-201ENST00000418461 509 ntBASIC15.69■□□□□ 0.1
VRK2Q86Y07 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 TSPY18P-201ENST00000441642 509 ntBASIC15.69■□□□□ 0.1
VRK2Q86Y07 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 SART3-203ENST00000546611 1184 ntBASIC15.69■□□□□ 0.1
VRK2Q86Y07 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 AL355877.3-201ENST00000622820 899 ntBASIC15.69■□□□□ 0.1
VRK2Q86Y07 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 AL021920.2-201ENST00000624828 1351 ntBASIC15.69■□□□□ 0.1
VRK2Q86Y07 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK2Q86Y07 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VRK2Q86Y07 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms