Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 AC092068.3-201ENST00000587894 2016 ntBASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRTM4Q86VH4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 HCG4-201ENST00000418983 998 ntBASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 AL031432.2-201ENST00000566714 459 ntBASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 AL928711.1-201ENST00000570165 459 ntBASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM4Q86VH4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 AC012569.1-201ENST00000591191 1524 ntBASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 AC106820.2-201ENST00000563775 3264 ntBASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 MIR3687-2-201ENST00000577708 61 ntBASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 MIR3687-1-201ENST00000614492 61 ntBASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM4Q86VH4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRTM4Q86VH4 AL121761.2-201ENST00000598007 1648 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms