Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 AL391256.1-201ENST00000443260 1855 ntBASIC14.16□□□□□ -0.14
ZNF546Q86UE3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 MIR935-201ENST00000401179 91 ntBASIC14.16□□□□□ -0.14
ZNF546Q86UE3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 C1QBPP2-201ENST00000528754 825 ntBASIC14.16□□□□□ -0.14
ZNF546Q86UE3 AC104390.1-201ENST00000555663 520 ntBASIC14.16□□□□□ -0.14
ZNF546Q86UE3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 KRT8P47-201ENST00000604727 1398 ntBASIC14.16□□□□□ -0.14
ZNF546Q86UE3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF546Q86UE3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 AL135905.2-201ENST00000584934 1404 ntBASIC14.15□□□□□ -0.14
ZNF546Q86UE3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF546Q86UE3 ME2P1-201ENST00000426028 1970 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms