Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL355994.2-201ENST00000447882 704 ntBASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 RN7SL752P-201ENST00000463779 287 ntBASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 MNT-208ENST00000575394 606 ntTSL 4 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 HLA-V-204ENST00000476601 1289 ntBASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 SLC25A1P3-201ENST00000395415 828 ntBASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AL390961.4-201ENST00000623958 2535 ntBASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 REXO1L6P-201ENST00000603433 1515 ntBASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AL080243.2-201ENST00000418783 582 ntBASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AL590560.3-201ENST00000623350 461 ntBASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13BQ7Z7G8 AL023806.1-201ENST00000603994 1649 ntBASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13BQ7Z7G8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms